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SCNpilot_BF_INOC_scaffold_4544

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4544_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..616
DNA (615bp) protein (205aa)
RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA id=12495631 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RnfABCDGE type electron transport complex subunit A
SCNpilot_BF_INOC_scaffold_4544_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616..1182
DNA (567bp) protein (189aa)
electron transporter RnfB n=1 Tax=Thiobacillus thioparus RepID=UPI00035E8F3D
electron transport complex protein RnfB; K03616 electron transport complex protein RnfB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
electron transport complex protein RnfB
SCNpilot_BF_INOC_scaffold_4544_3
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1508..2503
DNA (996bp) protein (332aa)
Electron transport complex protein RnfC n=1 Tax=Pseudomonas putida S11 RepID=J8V744_PSEPU
hypothetical protein Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_BF_INOC_scaffold_4544_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2803..3831
DNA (1029bp) protein (343aa)
electron transporter RnfG n=1 Tax=Thiobacillus thioparus RepID=UPI000366C1D3
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RnfABCDGE type electron transport complex subunit D
SCNpilot_BF_INOC_scaffold_4544_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3828..4478
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361736F
RnfABCDGE type electron transport complex subunit G; K03612 electron transport complex protein RnfG Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RnfABCDGE type electron transport complex subunit G
SCNpilot_BF_INOC_scaffold_4544_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4475..5152
DNA (678bp) protein (226aa)
electron transporter RsxE n=1 Tax=Thiobacillus thioparus RepID=UPI000372F93D
electron transport complex RsxE subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
SCNpilot_BF_INOC_scaffold_4544_7
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5149..5301
DNA (153bp) protein (51aa)
hypothetical protein id=12495625 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein id=12495625 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_4544_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5312..5956
DNA (645bp) protein (215aa)
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=12495624 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18)
SCNpilot_BF_INOC_scaffold_4544_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5956..6390
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365B5B0
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_4544_10
unknown

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comp(6658..7212)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4544_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7610..8449
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003775F96
response regulator receiver modulated diguanylate cyclase Tax=GWE1_Thiobacillus_62_9_curated
response regulator receiver modulated diguanylate cyclase
SCNpilot_BF_INOC_scaffold_4544_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8504..10138)
DNA (1635bp) protein (545aa)
acetyl-CoA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036BFDE9
long-chain fatty-acid-CoA ligase; K09181 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
long-chain fatty-acid-CoA ligase
Displaying 12 items

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