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SCNpilot_BF_INOC_scaffold_4798

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4798_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036760AD
transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_4798_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

662..1606
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362AC8C
Transporter {ECO:0000313|EMBL:KDN96429.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
putative transporter, EamA family protein
SCNpilot_BF_INOC_scaffold_4798_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1763..4435
DNA (2673bp) protein (891aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DF4FE
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_4798_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4440..4883)
DNA (444bp) protein (148aa)
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cyanate hydratase (EC:4.2.1.104)
cyanate hydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B365D
SCNpilot_BF_INOC_scaffold_4798_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4892..5053)
DNA (162bp) protein (54aa)
nitrate ABC transporter ATPases C and D; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Nitrate ABC transporter, ATPase subunits C and D id=1340122 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_4798_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5819..6670)
DNA (852bp) protein (284aa)
nitrate ABC transporter inner membrane subunit; K15577 nitrate/nitrite transport system permease protein id=12496316 bin=THIO_MID species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrate ABC transporter inner membrane subunit; K15577 nitrate/nitrite transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
nitrate ABC transporter inner membrane subunit
SCNpilot_BF_INOC_scaffold_4798_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6667..8025)
DNA (1359bp) protein (453aa)
Putative nitrate transporter component, NrtA id=1340120 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrate transporter component, NrtA; K15576 nitrate/nitrite transport system substrate-binding protein Tax=GWE1_Thiobacillus_62_9_curated
nitrate transporter component, NrtA
SCNpilot_BF_INOC_scaffold_4798_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8356..9942
DNA (1587bp) protein (529aa)
Transcriptional regulator, NifA subfamily, Fis Family id=1340119 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein Tax=GWE1_Thiobacillus_62_9_curated
Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_4798_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10632..11801
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase domain-containing protein id=12496312 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria
acyl-CoA dehydrogenase Tax=GWE1_Thiobacillus_62_9_curated
acyl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_4798_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11798..12187
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Putative uncharacterized protein id=1340116 bin=GWE1_T_denit_62_9 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
SCNpilot_BF_INOC_scaffold_4798_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12184..12336
DNA (153bp) protein (51aa)
rubredoxin-type Fe(Cys)4 protein; K05297 rubredoxin-NAD+ reductase [EC:1.18.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036436BA
rubredoxin family protein
Displaying 11 items

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