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SCNpilot_BF_INOC_scaffold_486

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_486_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493151 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270..1232)
DNA (963bp) protein (321aa)
ErfK/YbiS/YcfS/YnhG family protein id=12493150 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ErfK/YbiS/YcfS/YnhG family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1311..1616)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003821E6E
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_486_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1616..1882)
DNA (267bp) protein (89aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12493149 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
translation initiation factor IF-1
SCNpilot_BF_INOC_scaffold_486_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2189..3283)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DDF13
small-conductance mechanosensitive channel protein
Small-conductance mechanosensitive channel protein {ECO:0000313|EMBL:AAZ97415.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
SCNpilot_BF_INOC_scaffold_486_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3874..7152
DNA (3279bp) protein (1093aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820B7A
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
SCNpilot_BF_INOC_scaffold_486_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7237..7506
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B128
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7503..7826
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037174E7
Uncharacterized protein {ECO:0000313|EMBL:GAO36891.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8056..8643
DNA (588bp) protein (196aa)
molybdopterin oxidoreductase Fe4S4 region; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfate ABC transporter substrate-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037384C5
molybdopterin oxidoreductase Fe4S4 region
SCNpilot_BF_INOC_scaffold_486_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8692..11127
DNA (2436bp) protein (812aa)
formate dehydrogenase subunit alpha (EC:1.7.99.4)
formate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003696816
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:GAO35633.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulf
SCNpilot_BF_INOC_scaffold_486_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11137..12039
DNA (903bp) protein (301aa)
formate dehydrogenase-N subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C974B
formate dehydrogenase subunit beta; K00124 formate dehydrogenase, beta subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase subunit beta
SCNpilot_BF_INOC_scaffold_486_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12036..12653
DNA (618bp) protein (206aa)
fdoI; formate dehydrogenase, gamma subunit id=12493143 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
fdoI; formate dehydrogenase, gamma subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase
SCNpilot_BF_INOC_scaffold_486_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12716..13630
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371C5DC
formate dehydrogenase accessory protein FdhE; K02380 FdhE protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase accessory protein FdhE
SCNpilot_BF_INOC_scaffold_486_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13662..15056
DNA (1395bp) protein (465aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E6AD6
L-seryl-tRNA selenium transferase
SCNpilot_BF_INOC_scaffold_486_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15082..16179
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365A21E
transglutaminase domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transglutaminase domain-containing protein
SCNpilot_BF_INOC_scaffold_486_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16176..18080
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725423
selB_[H]; Selenocysteine-specific translation elongation factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
selenocysteine-specific translation elongation factor
SCNpilot_BF_INOC_scaffold_486_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18332..19168)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369DB95
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABJ86423.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
SCNpilot_BF_INOC_scaffold_486_18
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19406..19717
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F9E4E7
prophage regulatory ptotein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_486_19
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19734..19934
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NK34_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29860.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
SCNpilot_BF_INOC_scaffold_486_20
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19937..20272
DNA (336bp) protein (112aa)
PemK-like protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SZN5_9SYNE
growth inhibitor Tax=GWC2_Geobacteraceae_58_44_curated
PemK-like protein
SCNpilot_BF_INOC_scaffold_486_21
unknown

Not on your lists

comp(20323..20721)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_486_22
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20729..24751)
DNA (4023bp) protein (1341aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003717761
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:AEJ03049.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomona
SCNpilot_BF_INOC_scaffold_486_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25228..26763)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003768DB3
hypothetical protein; K07028 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26788..27093)
DNA (306bp) protein (102aa)
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S30
SCNpilot_BF_INOC_scaffold_486_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27142..27540)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C89A
TraR/DksA family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
SCNpilot_BF_INOC_scaffold_486_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27642..31283)
DNA (3642bp) protein (1214aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ97409.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteo
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_486_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31736..31897)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364547A
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_486_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31928..32428)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362A430
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_486_29

Not on your lists

32800..34455
DNA (1656bp) protein (552aa)
phosphoglucomutase (EC:5.4.2.2)
phosphoglucomutase n=1 Tax=Thiobacillus thioparus RepID=UPI0003762DDB
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:EQD56990.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagen
SCNpilot_BF_INOC_scaffold_486_30

Not on your lists

34556..36088
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FFF
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CBH98940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met
NodT family RND efflux system outer membrane lipoprotein
Displaying items 1-30 of 47 in total

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