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SCNpilot_BF_INOC_scaffold_5048

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5048_1
RifOxyB12_full_Sideroxydans_59_6_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(401..1030)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AAF17
hypothetical protein Tax=RifOxyB12_full_Sideroxydans_59_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5048_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1336..1485
DNA (150bp) protein (50aa)
RNA polymerase subunit sigma-32 n=1 Tax=Thiobacillus thioparus RepID=UPI00037116D6
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5048_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1488..1922
DNA (435bp) protein (145aa)
dihydroneopterin triphosphate pyrophosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI000379BEE4
ntpA; dATP pyrophosphohydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AAZ96397.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrifi
SCNpilot_BF_INOC_scaffold_5048_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1885..2682
DNA (798bp) protein (266aa)
endonuclease/exonuclease/phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI000372674B
endonuclease / exonuclease / phosphatase family protein; K06896 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
endonuclease / exonuclease / phosphatase
SCNpilot_BF_INOC_scaffold_5048_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2682..3875
DNA (1194bp) protein (398aa)
phospholipase D/transphosphatidylase; K06132 putative cardiolipin synthase [EC:2.7.8.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374C430
phospholipase D/transphosphatidylase
SCNpilot_BF_INOC_scaffold_5048_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3868..4320)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7F72
hypothetical protein; K09768 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_5048_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..5190)
DNA (858bp) protein (286aa)
metallopeptidase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E9F8E
putative neutral zinc metallopeptidase; K07054 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
neutral zinc metallopeptidase
SCNpilot_BF_INOC_scaffold_5048_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5484..6539
DNA (1056bp) protein (352aa)
outer membrane protein (porin) id=12498486 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
outer membrane protein (porin) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
outer membrane protein (porin)
SCNpilot_BF_INOC_scaffold_5048_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6756..7172)
DNA (417bp) protein (139aa)
peroxiredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037F066E
OsmC/Ohr family protein; K07397 putative redox protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OsmC/Ohr family protein
SCNpilot_BF_INOC_scaffold_5048_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7182..7943)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360933A
transmembrane protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_5048_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8060..8506
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Thiobacillus thioparus RepID=UPI000375671B
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplM; 50S ribosomal protein L13
SCNpilot_BF_INOC_scaffold_5048_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8503..8868
DNA (366bp) protein (122aa)
30S ribosomal protein S9 n=1 Tax=Thiobacillus RepID=UPI00036DE0EA
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpsI; 30S ribosomal protein S9
Displaying 12 items

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