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SCNpilot_BF_INOC_scaffold_713

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_713_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1989)
DNA (1989bp) protein (663aa)
hypothetical protein id=12497085 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes
SCNpilot_BF_INOC_scaffold_713_2
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1989..2423)
DNA (435bp) protein (145aa)
id=12497084 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497084 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_713_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2847..3317
DNA (471bp) protein (157aa)
transglycosylase id=12497083 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
lytic transglycosylase catalytic subunit
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_BF_INOC_scaffold_713_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..3859
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E8A37
lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_713_5
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3856..4086
DNA (231bp) protein (77aa)
hypothetical protein id=12497082 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein id=12497082 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_713_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4123..4443
DNA (321bp) protein (107aa)
TraA protein; K12069 conjugal transfer pilus assembly protein TraA id=12497081 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TraA protein; K12069 conjugal transfer pilus assembly protein TraA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraA protein
SCNpilot_BF_INOC_scaffold_713_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4464..4754
DNA (291bp) protein (97aa)
protein TraL; K12068 conjugal transfer pilus assembly protein TraL id=12497080 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein TraL; K12068 conjugal transfer pilus assembly protein TraL Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4754..5347
DNA (594bp) protein (198aa)
type IV conjugative transfer system protein TraE; K12067 conjugal transfer pilus assembly protein TraE id=12497079 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
traE; plasmid-like conjugative transfer protein TraE; K12067 conjugal transfer pilus assembly protein TraE Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
type IV conjugative transfer system protein TraE
SCNpilot_BF_INOC_scaffold_713_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..6050
DNA (744bp) protein (248aa)
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK id=12497078 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K12066 conjugal transfer pilus assembly protein TraK Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6050..7288
DNA (1239bp) protein (413aa)
protein TraB; K12065 conjugal transfer pilus assembly protein TraB id=12497077 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein TraB; K12065 conjugal transfer pilus assembly protein TraB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraB pilus assembly
SCNpilot_BF_INOC_scaffold_713_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7306..8106
DNA (801bp) protein (267aa)
disulfide bond isomerase, DsbC/G; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12497076 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8103..8684
DNA (582bp) protein (194aa)
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV id=12497075 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
type IV conjugative transfer system protein TraV; K12064 conjugal transfer pilus assembly protein TraV Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
membrane lipoprotein lipid attachment site
SCNpilot_BF_INOC_scaffold_713_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8681..11254
DNA (2574bp) protein (858aa)
protein TraC; K12063 conjugal transfer ATP-binding protein TraC id=12497074 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein TraC; K12063 conjugal transfer ATP-binding protein TraC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
IncF plasmid conjugative transfer pilus assembly protein TraC
SCNpilot_BF_INOC_scaffold_713_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11251..11679
DNA (429bp) protein (143aa)
hypothetical protein id=12497073 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_713_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11676..12221
DNA (546bp) protein (182aa)
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI id=12497072 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K12062 conjugal transfer pilin signal peptidase TrbI Tax=GWE1_Thiobacillus_62_9_curated
Conjugative signal peptidase TrhF
SCNpilot_BF_INOC_scaffold_713_16
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12238..12645
DNA (408bp) protein (136aa)
id=12497071 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497071 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_713_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13272
DNA (615bp) protein (205aa)
type-F conjugative transfer system protein TraW; K12061 conjugal transfer pilus assembly protein TraW id=12497070 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
membrane lipoprotein lipid attachment site; K12061 conjugal transfer pilus assembly protein TraW Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
membrane lipoprotein lipid attachment site
SCNpilot_BF_INOC_scaffold_713_18
Edwardsiella ictaluri, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13285..14013
DNA (729bp) protein (243aa)
hypothetical protein id=12497069 bin=THIO_MID species=Edwardsiella ictaluri genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR67577.1}; TaxID=634503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella
SCNpilot_BF_INOC_scaffold_713_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14010..15026
DNA (1017bp) protein (339aa)
Similar to plasmid-like sex pilus assembly and synthesis protein traU id=1311306 bin=GWE1_T_denit_62_9 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU Tax=GWE1_Thiobacillus_62_9_curated
IncF plasmid conjugative transfer pilus assembly protein TraU
SCNpilot_BF_INOC_scaffold_713_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15029..15718
DNA (690bp) protein (230aa)
IncF plasmid conjugative transfer protein TrbC
hypothetical protein id=12497067 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_713_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15715..16821
DNA (1107bp) protein (369aa)
id=12497066 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_713_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16818..18125
DNA (1308bp) protein (436aa)
Conjugal transfer mating pair stabilization protein TraN id=1311309 bin=GWE1_T_denit_62_9 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN Tax=GWE1_Thiobacillus_62_9_curated
conjugal transfer mating pair stabilization protein TraN
SCNpilot_BF_INOC_scaffold_713_23
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18130..18930
DNA (801bp) protein (267aa)
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_713_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..19331
DNA (405bp) protein (135aa)
hypothetical protein id=1311310 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_713_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19328..20143
DNA (816bp) protein (272aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12497062 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20158..21624
DNA (1467bp) protein (489aa)
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH id=12497061 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH Tax=GWE1_Thiobacillus_62_9_curated
conjugative transfer pilus assembly protein TraH
SCNpilot_BF_INOC_scaffold_713_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21628..24492
DNA (2865bp) protein (955aa)
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG id=12497060 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_28
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24493..24741)
DNA (249bp) protein (83aa)
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_713_29
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24780..24974)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GFV7_METAL
Uncharacterized protein {ECO:0000313|EMBL:EIC28708.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrob
hypothetical protein
SCNpilot_BF_INOC_scaffold_713_30
unknown

Not on your lists

comp(24974..25267)
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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