ggKbase home page

SCNpilot_BF_INOC_scaffold_902

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_902_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..792)
DNA (792bp) protein (264aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] id=12497881 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00005}; TaxID=292415 species="Bacte
SCNpilot_BF_INOC_scaffold_902_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(823..1062)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366D9A8
Putative uncharacterized protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_902_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1059..1976)
DNA (918bp) protein (306aa)
ornithine carbamoyltransferase (EC:2.1.3.3) Tax=GWE1_Thiobacillus_62_9_curated
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000368520B
SCNpilot_BF_INOC_scaffold_902_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1976..3157)
DNA (1182bp) protein (394aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
acetylornithine aminotransferase (EC:2.6.1.11)
acetylornithine aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000362D780
SCNpilot_BF_INOC_scaffold_902_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3264..3764)
DNA (501bp) protein (167aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E4CB8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_902_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3779..3874)
DNA (96bp) protein (32aa)
Putative uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Putative uncharacterized protein id=1342214 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_902_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4028..4309
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003716284
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_902_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4398..4598)
DNA (201bp) protein (67aa)
30S ribosomal protein S20 n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F4BB
30S ribosomal protein S20P; K02968 small subunit ribosomal protein S20 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
30S ribosomal protein S20
SCNpilot_BF_INOC_scaffold_902_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4808..6346
DNA (1539bp) protein (513aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A6EEC
virulence factor MVIN-like protein; K03980 virulence factor Tax=GWE1_Thiobacillus_62_9_curated
virulence factor MVIN-like protein
SCNpilot_BF_INOC_scaffold_902_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6425..7357
DNA (933bp) protein (311aa)
FMN adenylyltransferase / riboflavin kinase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWE1_Thiobacillus_62_9_curated
FMN adenylyltransferase / riboflavin kinase (EC:2.7.1.26 2.7.7.2)
FMN adenylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036EF1A5
SCNpilot_BF_INOC_scaffold_902_11
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7335..9062)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7IGX4_9BURK
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
SCNpilot_BF_INOC_scaffold_902_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9118..10104
DNA (987bp) protein (329aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=GWE1_Thiobacillus_62_9_curated
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D364D
SCNpilot_BF_INOC_scaffold_902_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10097..10594
DNA (498bp) protein (166aa)
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
peptidase A8 n=1 Tax=Thiobacillus thioparus RepID=UPI00037079F7
SCNpilot_BF_INOC_scaffold_902_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10591..11028
DNA (438bp) protein (146aa)
putative FKBP-type peptidyl-prolyl cis-trans isomerase 2; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] id=12494088 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative FKBP-type peptidyl-prolyl cis-trans isomerase 2; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] Tax=GWE1_Thiobacillus_62_9_curated
FKBP-type peptidyl-prolyl cis-trans isomerase 2
SCNpilot_BF_INOC_scaffold_902_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11042..11968
DNA (927bp) protein (309aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037DFA4B
SCNpilot_BF_INOC_scaffold_902_16
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..12376
DNA (171bp) protein (57aa)
id=12494086 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
id=12494086 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_902_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12419..12859)
DNA (441bp) protein (147aa)
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=CG_Hydro_01
prepilin-type N-terminal cleavage/methylation domain-containing protein id=12494085 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_BF_INOC_scaffold_902_18
unknown

Not on your lists

comp(12856..13200)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_902_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13210..16650)
DNA (3441bp) protein (1147aa)
fimbrial assembly protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6679F
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; K02674 type IV pilus assembly protein PilY1 Tax=CG_Hydro_01
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
SCNpilot_BF_INOC_scaffold_902_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16669..17223)
DNA (555bp) protein (185aa)
Tfp pilus assembly protein PilX Tax=CG_Hydro_01
Tfp pilus assembly protein PilX id=12497896 bin=THIO_MID species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tfp pilus assembly protein PilX
SCNpilot_BF_INOC_scaffold_902_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..18237)
DNA (1002bp) protein (334aa)
Type IV pilus assembly protein PilW n=1 Tax=Thauera sp. 28 RepID=N6YG18_9RHOO
hypothetical protein; K02672 type IV pilus assembly protein PilW Tax=CG_Hydro_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_902_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18234..18689)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370DFFE
Tfp pilus assembly protein PilV-like protein; K02671 type IV pilus assembly protein PilV Tax=CG_Hydro_01
type IV pilus modification protein PilV
SCNpilot_BF_INOC_scaffold_902_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18698..19210)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367D6D2
putative type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT Tax=CG_Hydro_01
type-4 fimbrial pilin related signal peptide protein
SCNpilot_BF_INOC_scaffold_902_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19387..19911)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003781618
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
type-4 fimbrial pilin related signal peptide protein
SCNpilot_BF_INOC_scaffold_902_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20001..21104
DNA (1104bp) protein (368aa)
putative D-amino acid oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003736CBE
D-amino acid oxidase
SCNpilot_BF_INOC_scaffold_902_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21259..22185
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037491F9
hypothetical protein; K07276 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_902_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22164..23297
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037533D0
group 1 glycosyl transferase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
group 1 glycosyl transferase
SCNpilot_BF_INOC_scaffold_902_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23329..24387)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D984C
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_902_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24396..25487)
DNA (1092bp) protein (364aa)
heptosyltransferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0D2D
heptosyltransferase rbh
SCNpilot_BF_INOC_scaffold_902_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25484..27319)
DNA (1836bp) protein (612aa)
multidrug MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003737E24
putative epimerase/dehydratase-like biosynthesis protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
epimerase/dehydratase-like biosynthesis protein
Displaying items 1-30 of 69 in total

View Taxonomy