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SCNpilot_BF_INOC_scaffold_919

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_919_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003684AC5
hypothetical protein; K09922 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341..835
DNA (495bp) protein (165aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiobacillus thioparus RepID=UPI000375E044
SCNpilot_BF_INOC_scaffold_919_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

825..1958
DNA (1134bp) protein (378aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] Tax=GWE1_Thiobacillus_62_9_curated
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003693E5A
SCNpilot_BF_INOC_scaffold_919_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1948..2415
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4CFF
exported protein; K09005 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
exported protein
SCNpilot_BF_INOC_scaffold_919_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2421..3017)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A133F
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3455..4153)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A6EDB
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..4788)
DNA (633bp) protein (211aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380D4DB
SCNpilot_BF_INOC_scaffold_919_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5818..7815
DNA (1998bp) protein (666aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B267E
SCNpilot_BF_INOC_scaffold_919_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7823..8572)
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493649 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..9787
DNA (1125bp) protein (375aa)
divalent ion tolerance protein CutA n=1 Tax=Thiobacillus thioparus RepID=UPI000369ED49
metal dependent phosphohydrolase; K13815 two-component system, response regulator RpfG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_919_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9791..12322
DNA (2532bp) protein (844aa)
periplasmic sensor hybrid histidine kinase; K10715 two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EA9DB
periplasmic sensor hybrid histidine kinase
SCNpilot_BF_INOC_scaffold_919_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12302..13204)
DNA (903bp) protein (301aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Thiobacillus thioparus RepID=UPI00037231A1
Putative RpfF protein {ECO:0000313|EMBL:AAZ98625.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus den
SCNpilot_BF_INOC_scaffold_919_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13380..14207)
DNA (828bp) protein (276aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360B7EC
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14207..14662)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=1304129 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98627.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_919_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14665..15549)
DNA (885bp) protein (295aa)
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
N-acetylglutamate kinase (EC:2.7.2.8) rbh
acetylglutamate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000370A163
SCNpilot_BF_INOC_scaffold_919_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15633..16052)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371AA2C
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heat shock protein Hsp20
SCNpilot_BF_INOC_scaffold_919_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16197..16763
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C659D
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_919_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16760..17017
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036660A1
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_919_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17087..17398
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003709838
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17401..18252
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037475DA
hypothetical protein; K09930 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18227..19003
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F9A14
hypothetical protein; K09929 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19031..19474)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FCBAD
hypothetical protein; K09796 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_23
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19503..20450)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F54CD
Uncharacterized protein {ECO:0000313|EMBL:KIF81309.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
SCNpilot_BF_INOC_scaffold_919_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20639..22972
DNA (2334bp) protein (778aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003715CF6
oprC; TonB-dependent receptor protein; K02014 iron complex outermembrane recepter protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_919_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23160..24482
DNA (1323bp) protein (441aa)
periplasmic sensor signal transduction histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3] Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B9D3
periplasmic sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_919_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24479..25012
DNA (534bp) protein (178aa)
chemotaxis protein CheY n=1 Tax=Thiobacillus thioparus RepID=UPI000374ED91
two component Fis family transcriptional regulator; K15012 two-component system, response regulator RegA Tax=GWE1_Thiobacillus_62_9_curated
Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_919_27
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25036..25935)
DNA (900bp) protein (300aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
undecaprenyl-diphosphatase (EC:3.6.1.27)
UDP pyrophosphate phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CF274
SCNpilot_BF_INOC_scaffold_919_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..27643)
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037141A9
diguanylate cyclase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_919_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27713..28723)
DNA (1011bp) protein (337aa)
phosphomethylpyrimidine synthase ThiC n=1 Tax=Thiobacillus thioparus RepID=UPI00036C6FEA
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiamine biosynthesis protein ThiC
Displaying 29 items

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