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SCNpilot_BF_INOC_scaffold_1103_33

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(45852..46562)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus thioparus RepID=UPI000376BE13 similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 236.0
  • Bit_score: 465
  • Evalue 3.30e-128
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 236.0
  • Bit_score: 455
  • Evalue 9.60e-126
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 236.0
  • Bit_score: 455
  • Evalue 4.80e-125

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGTAGGTAAACCATCGTCGCAAGACGAGCAGATCACCAAGTATGCGCCGCTGGTCAAGCGCATTGCATATCATATGATGGCGCGCCTGCCCGCCAGCGTAGAAGTCGACGATCTCATCCAGGTCGGGCTGATCGGCCTGATGGATGCGGTAGGGCGCTTCGACGGCACCCAGGGCGCGCAGTTCGAATCCTATGCTACCCAGCGCATCCGTGGCGCCATGCTTGACGAGTTGCGCGAGGCGGATTGGCTGCCGCGCCATGTACGGCAGAAATCCCGGCAGATCGAAGCCGCCATCCACCGGCTGGAGCAGCGCAACGGCAAGTCGCCGTCCGAGCAGGAAATCTCCGCCGAGCTGGGCATGCCGATCGATCAGTATCAATCCATGCTGGGCGACGTGAAATGTTCCCAGCTGCTCTATTACGAAGACTTCTCGGATGAGGACAGCGCCAGCTTTCTGGAGCGCTATCTGGTTGACGGCAGCAATGACCCGTTGGCAGTACTCGAGGATGAAGGTTTCCGCGACAGCCTGATCGCCGCGATCCACCACCTGCCGGAGCGCGAGCGCAGCATGATGGGCATGTACTACGAACAGGACATGAATCTGAAGGAAATCGGGGCAGTGCTCGGCGTGTCAGAGTCACGCGTGTGCCAGCTGCATTCTCAGGCGGTCGCGCGTCTGCGTGCCCAACTCAAGATCTGGAAAGACTGA
PROTEIN sequence
Length: 237
MVGKPSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVGRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIHRLEQRNGKSPSEQEISAELGMPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDEGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD*