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SCNpilot_BF_INOC_scaffold_1313_15

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 13056..13901

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE403 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 277.0
  • Bit_score: 542
  • Evalue 2.50e-151
sigma-70 factor; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 281.0
  • Bit_score: 529
  • Evalue 4.10e-147
sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 281.0
  • Bit_score: 492
  • Evalue 1.10e-136

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAATCAATCGATGTCTTTACCCATTCCCGCAGCTTATAGCCTGGATAGCTATATTCAGACCGTCAACCGCTATCCCATGCTCAGTCTGGAGGATGAGCAGAAGTTTGCGCGTGCCTGGCACGACAAGCAGGATGTCGAAGCCGCCCGTCAGTTGGTTGTCTCACATCTCCGCGTAGTCGTAAGCGTAGCGCGACACTACCTCGGCTACGGCCTGCCGCACGCCGATCTCATCCAGGAAGGCAATGTCGGCTTGATGAAGGCCGTGAAACGCTTCGACCCGGACCGTGGCGTGCGTCTGGTGTCGTTCGCGCTGCACTGGATCCGCGCCGAAATCCACGAATATGTCCTGAAGAACTGGCGTCTAGTCAAGGTGGCGACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAGCCTGAAACAGTCGCTCAATGCCTTGACGCTCAAGGAAGCCGACGCCATGGCCCGCGAACTCAATGTCAGCCGCAAGGACGTACTGGAGATGGAAACGCGCCTGTCGGGGCACGATGTATCGATCGACCCGACCGTGGACGATGGCGAGGAAAGCTACAGCCCACTTGCCTATCTGGCGAGCCCGGACGAAAACCCGGCCCAGTTGCTGGAACGCGAGCAGACCGAGCAATTGCGGCACAAAGGGCTGGCCAACGCACTGGAAGATCTTGACGAACGCAGCCGCCACATTATCGAGGCGCGCTGGCTGACCGAGGGTGAGACCGCCACGCTGCACGAACTGGCTGCTGAATATGGCATCTCTGCTGAACGCATCCGCCAGATCGAAGCGCGTGCCCTGCAGAAAATGCGCGCCGCGATCCCGGCATAA
PROTEIN sequence
Length: 282
MNQSMSLPIPAAYSLDSYIQTVNRYPMLSLEDEQKFARAWHDKQDVEAARQLVVSHLRVVVSVARHYLGYGLPHADLIQEGNVGLMKAVKRFDPDRGVRLVSFALHWIRAEIHEYVLKNWRLVKVATTKAQRKLFFNLRSLKQSLNALTLKEADAMARELNVSRKDVLEMETRLSGHDVSIDPTVDDGEESYSPLAYLASPDENPAQLLEREQTEQLRHKGLANALEDLDERSRHIIEARWLTEGETATLHELAAEYGISAERIRQIEARALQKMRAAIPA*