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SCNpilot_BF_INOC_scaffold_1313

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1313_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D750D
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1313_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94..807)
DNA (714bp) protein (238aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00036DFF89
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1313_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..1931)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371F6CC
RND family efflux transporter MFP subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_1313_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1928..3280)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363EDC2
Outer membrane efflux protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
outer membrane protein
SCNpilot_BF_INOC_scaffold_1313_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3462..4274
DNA (813bp) protein (271aa)
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=GWE1_Thiobacillus_62_9_c
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E74E5
SCNpilot_BF_INOC_scaffold_1313_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4348..6312
DNA (1965bp) protein (655aa)
GTPase n=1 Tax=Thiobacillus thioparus RepID=UPI0003681179
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1313_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6317..6568)
DNA (252bp) protein (84aa)
ferredoxin protein id=12495678 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ferredoxin protein Tax=GWE1_Thiobacillus_62_9_curated
ferredoxin protein
SCNpilot_BF_INOC_scaffold_1313_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6587..7069)
DNA (483bp) protein (161aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-
phosphopantetheine adenylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B6473
SCNpilot_BF_INOC_scaffold_1313_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7077..7652)
DNA (576bp) protein (192aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein; K00599 [EC:2.1.1.-] id=12494792 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_1313_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7642..8949)
DNA (1308bp) protein (436aa)
insulinase family protein; K01422 [EC:3.4.99.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
zinc protease n=1 Tax=Thiobacillus thioparus RepID=UPI0003693A0D
insulinase
SCNpilot_BF_INOC_scaffold_1313_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8939..10300)
DNA (1362bp) protein (454aa)
insulinase family protein; K01422 [EC:3.4.99.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase M16 n=1 Tax=Thiobacillus thioparus RepID=UPI00037810EF
insulinase
SCNpilot_BF_INOC_scaffold_1313_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10396..11400
DNA (1005bp) protein (335aa)
cell division protein FtsY n=1 Tax=Thiobacillus thioparus RepID=UPI00036C836F
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria;
SCNpilot_BF_INOC_scaffold_1313_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11397..12059
DNA (663bp) protein (221aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000370645D
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cell division ATP-binding protein FtsE
SCNpilot_BF_INOC_scaffold_1313_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..12964
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FFA3B
cell division protein FtsX; K09811 cell division transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
cell division protein FtsX
SCNpilot_BF_INOC_scaffold_1313_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13056..13901
DNA (846bp) protein (282aa)
RNA polymerase sigma 70 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE403
sigma-70 factor; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Thiobacillus_62_9_curated
sigma-70 factor
SCNpilot_BF_INOC_scaffold_1313_16
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14088..14927
DNA (840bp) protein (280aa)
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1] id=12494799 bin=THIO_HI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Carboxylesterase {ECO:0000313|EMBL:GAO34138.1}; EC=3.1.1.1 {ECO:0000313|EMBL:GAO34138.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriph
alpha/beta hydrolase fold protein
SCNpilot_BF_INOC_scaffold_1313_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14950..15192
DNA (243bp) protein (81aa)
acyl carrier protein id=12494800 bin=THIO_HI species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=THIO_HI organism_group=Betaproteobacteria
acyl carrier protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1313_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15189..16418
DNA (1230bp) protein (410aa)
fabF; 3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] id=12494801 bin=THIO_HI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
fabF; 3-oxoacyl-ACP synthase
SCNpilot_BF_INOC_scaffold_1313_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16421..17095
DNA (675bp) protein (225aa)
two component transcriptional regulator id=12494802 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AAZ45936.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechlorom
SCNpilot_BF_INOC_scaffold_1313_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17076..18458
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechl
sensor histidine kinase id=12494803 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sensor histidine kinase
SCNpilot_BF_INOC_scaffold_1313_21
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18601..19875
DNA (1275bp) protein (425aa)
Outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC id=12494804 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AAZ45932.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" sour
SCNpilot_BF_INOC_scaffold_1313_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19872..21059
DNA (1188bp) protein (396aa)
secretion protein HlyD id=12494805 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AAZ45933.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatic
SCNpilot_BF_INOC_scaffold_1313_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21061..24159
DNA (3099bp) protein (1033aa)
heavy metal efflux pump CzcA id=12494806 bin=THIO_HI species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heavy metal efflux pump CzcA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ45934.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" sourc
SCNpilot_BF_INOC_scaffold_1313_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24339..24446)
DNA (108bp) protein (36aa)
id=12494807 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_1313_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24520..24711)
DNA (192bp) protein (64aa)
cytochrome oxidase maturation protein Cbb3 n=1 Tax=Thiobacillus thioparus RepID=UPI00037E4455
cytochrome oxidase maturation protein cbb3-type Tax=GWE1_Thiobacillus_62_9_curated
cytochrome oxidase maturation protein cbb3-type
SCNpilot_BF_INOC_scaffold_1313_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24708..25484)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CC18B
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1313_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25477..26916)
DNA (1440bp) protein (480aa)
iron-sulfur cluster-binding protein id=12494810 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
iron-sulfur cluster-binding protein Tax=GWE1_Thiobacillus_62_9_curated
(Fe-S)-binding protein
SCNpilot_BF_INOC_scaffold_1313_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26989..27909)
DNA (921bp) protein (307aa)
cytochrome C oxidase subunit III n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB899
cytochrome c oxidase cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome c oxidase cbb3-type subunit III
Displaying 28 items

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