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SCNpilot_BF_INOC_scaffold_1418_20

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 13248..14378

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 378.0
  • Bit_score: 735
  • Evalue 3.60e-209
type IV pilus assembly protein, PilB similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 377.0
  • Bit_score: 696
  • Evalue 3.00e-198
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 377.0
  • Bit_score: 696
  • Evalue 1.50e-197

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGGCTGCTGTGACAAACACCAACAATTTAACCGGGCTGGCGCGTGCCATGGTCAACCATGGCTGGCTCTCCGAGGACGACGCCGAGGGAGTGTGGAAACGCGCCAGCCAGTCGGGCGATTCGTTCGTGACCGAATTGATCAAAGGGCGGCGGTTCAAGTCTGATCAGGTTGCCGAGTTTGCGGCTGCCTCGTTCGGCTTTCCCTATCTGGACCTGAATGCCATGGATCATGAGAGCCTGCCGCAAGGGCTGCTCGATCCGAAGCTGGTGCAGAAACGGCGGGTGCTCGCCTTGTATCAGCGGGGCAACAAGCTGTATGTGGCGACGTCAGACCCTACGCATCTGCAGGCGCTGGACGAGGTGAAATTCCAGACCGGCCAGGCGGTGGAACCCGTGGTGGTGGAGGACGACAAGCTCGGCAAGCTCATCGAGAAGATGGGTGAAGCGAACGACAACACGATGGCTGTGTTGAATGCCGAAGACCTCAATCTGGATTTCGCCGACGAGGAAAGTACCGCTGCCCAGCAGGACACTGGCGGCATCGAAATCGACGATGCGCCCGTGGTGCGCTATCTGCAGAAGATCATGCTCGACGCCATCAATATCGGCGCATCCGATATTCACTTCGAGCCGTACGAGAAGTTTTACCGCATCCGTTATCGGCGTGACGGCATTCTGTCCGAAATCGCCCAGCCGCCAATGGCGATCAAGGACAAGGTGGCGTCGCGCATCAAGGTGTTGTCGCGGCTGGATATTTCCGAAAAGCGTGTGCCGCAAGATGGCCGCATGAAAATGGTGCTGTCGAAGAATCGCGCCATCGATTTCCGGGTCAGCACCTTGCCCACGCTGTACGGCGAAAAGATCGTCATGCGTATTCTCGATCCCACCAGCGCGCAGCTGGGGATCGAGGCGCTGGGGTATGAGCCGTGGCAGAAGGAGCTTTTGCTCAATGCGGTGCAACGCCCCTATGGCATGGTGCTGGTGACCGGCCCGACCGGTTCCGGCAAGACGGTGTCGCTCTATACCTGCCTGAATATCCTCAACAAGCCCGACGTCAATATCTCCACGGCGGAAGACCCGGCGGAAATCCAGTTGCCGGGGATCAACCAGGTCAACGTCAACGACAAGGCC
PROTEIN sequence
Length: 377
MAAVTNTNNLTGLARAMVNHGWLSEDDAEGVWKRASQSGDSFVTELIKGRRFKSDQVAEFAAASFGFPYLDLNAMDHESLPQGLLDPKLVQKRRVLALYQRGNKLYVATSDPTHLQALDEVKFQTGQAVEPVVVEDDKLGKLIEKMGEANDNTMAVLNAEDLNLDFADEESTAAQQDTGGIEIDDAPVVRYLQKIMLDAINIGASDIHFEPYEKFYRIRYRRDGILSEIAQPPMAIKDKVASRIKVLSRLDISEKRVPQDGRMKMVLSKNRAIDFRVSTLPTLYGEKIVMRILDPTSAQLGIEALGYEPWQKELLLNAVQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPDVNISTAEDPAEIQLPGINQVNVNDKA