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SCNpilot_BF_INOC_scaffold_1418

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1418_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI00036783EB
hypothetical protein; K09117 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1418_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379..591)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS21_THIDA
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_1418_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1135..1629
DNA (495bp) protein (165aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
UGMP family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F8827
SCNpilot_BF_INOC_scaffold_1418_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1633..2433)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003811AE9
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1418_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2450..3052)
DNA (603bp) protein (201aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glycerol-3-phosphate acyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00038288E8
acyl-phosphate glycerol-3-phosphate acyltransferase
SCNpilot_BF_INOC_scaffold_1418_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3110..3484
DNA (375bp) protein (125aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=GWE1_Thiobacillus_62_9_curated
dienelactone hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037233CF
dihydroneopterin aldolase
SCNpilot_BF_INOC_scaffold_1418_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3505..4218
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003730005
hypothetical protein; K07090 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1418_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4215..5171
DNA (957bp) protein (319aa)
putative succinylglutamate desuccinylase; K01175 [EC:3.1.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinylglutamate desuccinylase n=1 Tax=Thiobacillus thioparus RepID=UPI000362733F
succinylglutamate desuccinylase
SCNpilot_BF_INOC_scaffold_1418_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5175..6065)
DNA (891bp) protein (297aa)
tyrosine recombinase XerD n=1 Tax=Thiobacillus thioparus RepID=UPI000380E9BF
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_1418_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6046..6516)
DNA (471bp) protein (157aa)
methylated-DNA-(protein)-cysteine S-methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CDE6B
methylated-DNA-(protein)-cysteine S-methyltransferase
SCNpilot_BF_INOC_scaffold_1418_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6591..6809)
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493274 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_1418_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..7416)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036354E6
TetR family transcriptional regulator
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
SCNpilot_BF_INOC_scaffold_1418_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7567..7950)
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=1 Tax=Thiobacillus thioparus RepID=UPI0003804A71
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplS; 50S ribosomal protein L19
SCNpilot_BF_INOC_scaffold_1418_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8040..8810)
DNA (771bp) protein (257aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=12493276 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
SCNpilot_BF_INOC_scaffold_1418_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8810..9289)
DNA (480bp) protein (160aa)
16S rRNA-processing protein RimM n=1 Tax=Thiobacillus thioparus RepID=UPI0003781D21
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
16S rRNA-processing protein RimM
SCNpilot_BF_INOC_scaffold_1418_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9318..9569)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003790ADB
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpsP; 30S ribosomal protein S16
SCNpilot_BF_INOC_scaffold_1418_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9640..10983)
DNA (1344bp) protein (448aa)
signal recognition particle protein Srp54 n=1 Tax=Thiobacillus thioparus RepID=UPI00036FA614
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydroge
SCNpilot_BF_INOC_scaffold_1418_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11053..11838
DNA (786bp) protein (262aa)
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein id=12493280 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
SCNpilot_BF_INOC_scaffold_1418_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11850..13148
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374E723
transmembrane protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_1418_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13248..14378
DNA (1131bp) protein (377aa)
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B
type IV pilus assembly protein, PilB
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
Displaying 20 items

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