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SCNpilot_BF_INOC_scaffold_1491_7

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(7559..7843)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV02_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 94.0
  • Bit_score: 181
  • Evalue 3.80e-43
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 94.0
  • Bit_score: 187
  • Evalue 7.40e-45
putative conjugal transfer TrbD transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 94.0
  • Bit_score: 181
  • Evalue 1.10e-43

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAGTGCCGCCAACGAATTCGCGGCAGGTTTCGCCAGTGGCTTCGAGATTCCGCTGCATCGCTCGCTGACAGAACCGATCTTGCTGGGCGGCGCACCGCGCACTGTGGCGATTGCCAACGGCACGCTGGCCGCTGCAGTCGGCTTGGGCCTGCAGCTGTGGATTCCGGGGCTGGTGCTGTGGATCGTTGGCCATTCGCTGGCGGTTTGGGGTGCGCGGCTCGATCCGAAGTTCATGGCCGTGTTCGCCCGCCATATCAAGCACCGCCCGCTGCTGGACGTGTGA
PROTEIN sequence
Length: 95
MSAANEFAAGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGLVLWIVGHSLAVWGARLDPKFMAVFARHIKHRPLLDV*