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SCNpilot_BF_INOC_scaffold_1491

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1491_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1246)
DNA (1245bp) protein (415aa)
Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV08_POLNA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
conjugation TrbI family protein
SCNpilot_BF_INOC_scaffold_1491_2
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1249..2262)
DNA (1014bp) protein (338aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV07_POLNA
conjugal transfer protein TrbG/VirB9/CagX
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABM39485.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polarom
SCNpilot_BF_INOC_scaffold_1491_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2259..2963)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV06_POLNA
conjugal transfer protein TrbF
Conjugal transfer protein {ECO:0000313|EMBL:ABM39484.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_BF_INOC_scaffold_1491_4
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2976..4361)
DNA (1386bp) protein (462aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV05_POLNA
conjugal transfer protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM39483.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_BF_INOC_scaffold_1491_5
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4371..5099)
DNA (729bp) protein (243aa)
Putative conjugal transfer TrbJ signal peptide protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV04_POLNA
conjugal transfer protein TrbJ
Putative conjugal transfer TrbJ signal peptide protein {ECO:0000313|EMBL:ABM39482.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
SCNpilot_BF_INOC_scaffold_1491_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5096..7537)
DNA (2442bp) protein (814aa)
AAA ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV03_POLNA
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 Tax=GWA2_Burkholderiales_64_37_curated
conjugal transfer ATPase TrbE
SCNpilot_BF_INOC_scaffold_1491_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7559..7843)
DNA (285bp) protein (95aa)
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV02_POLNA
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
putative conjugal transfer TrbD transmembrane protein
SCNpilot_BF_INOC_scaffold_1491_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7840..8208)
DNA (369bp) protein (123aa)
Conjugal transfer protein TrbC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV01_POLNA
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=GWA2_Burkholderiales_64_37_curated
conjugal transfer protein TrbC
SCNpilot_BF_INOC_scaffold_1491_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8205..9254)
DNA (1050bp) protein (350aa)
Type II secretion system protein E n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV00_POLNA
type II secretion system protein E; K03196 type IV secretion system protein VirB11 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
type II secretion system protein E
SCNpilot_BF_INOC_scaffold_1491_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9251..9703)
DNA (453bp) protein (151aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ9_POLNA
CopG/DNA-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
CopG/DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1491_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9700..11700)
DNA (2001bp) protein (667aa)
TRAG family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ8_POLNA
conjugal transfer coupling protein TraG
TRAG family protein {ECO:0000313|EMBL:ABM39476.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivo
SCNpilot_BF_INOC_scaffold_1491_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11986..12228)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ7_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39475.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_BF_INOC_scaffold_1491_13
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..12647)
DNA (408bp) protein (136aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM39474.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
Displaying 13 items

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