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SCNpilot_BF_INOC_scaffold_1544_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1126..2691)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein id=12494310 bin=THIO_HI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 409.0
  • Bit_score: 777
  • Evalue 6.60e-222
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EZP58166.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia. similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 477.0
  • Bit_score: 643
  • Evalue 3.60e-181
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 477.0
  • Bit_score: 641
  • Evalue 1.60e-181

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGAGTCATATGCCTGTTTGCCGTCCTGCCGCATCGGGAAGCACTGGCGCCCCGCACGATCAGAACGCCGATGCCCGCGCCGGCATCGCTTCCGCAGCGCGCGCCAAACGCACCGGCTGGCCATGGCGACATGCCATGGTCGCCGCGGCCGTCGGCGCGCTCTGTTCGGGCTGCGCATCCCTGGCGCCGCAGTACGACGCGCCCCCCTCGCCGGTGCCGGACACCTGGCTGGACGCCGCGCAAGGCGCGCAAGGACATGCCGCATCGGCCCTCGCGTGGAACGACTACTTCACCGACCCGATGTTGAAGCGGTTGATTCAGACCGCGCTGGACAACAACCGGGATCTGCGCGTGGCCCTGCTGCGGGTCGAGGAAGTCCGTGCGGCGTACCAGATCCAGCGCGCGGACCTGTTCCCGCAGGTCAACGCGGGGGCGCAGGGTGCGCGGGCCCGGATCCCCGGAGACCTCAATCCGAGTGGCGGCCCGGTCACCGGCGGGGAGTACCGCGCCGAGGTCGGCGTGAGCAGTTGGGAACTGGATCTGTGGGGCCGGGTACGCAACCTCAACGAGGCGGCGCTGCAGCAATGGCTGGCCACGCAGGCGGGCAGCCGGGCAGCCCGCACGGCCTTGATCGCCCAGGTCGCCGACACCTACCTGAACGTGCGGGATATGAATGAGCGTGTGGCGCTGGCCCGGCGCACCGTCGAGACCCGGCAGGAGTCGTTCCGTATCTTCAACCGTCGCGTCGAAGTCGGATCGACCTCCAGGCTGGATCTGATGCAGGTGCAGACACTCCTGATCCAGGCGCAAACCCTGCTGGCGCAACTGGAACAGGCCCGCGCGGCGCAGATCCATGCGCTGGGCCTGCTCATCGGAGCCGACCCGGGTCCACTGCCTGAAGCCGCCCCGTTCGATGAAACCCTGGTGCTGGCCGAACTGGCGCCGGGTTTGCCGTCGGCGCTGTTGACGGCGCGCCCTGACATCGTGGCCGCCGAACATCGCCTGATCGCGGCGCACGCCGACATCGGTGCGGCGCGCGCGGCCTTCTTTCCCCGCATCGCCCTGACCGGCAGCCTGGGCACCGCCAGCGCCGAACTCGACGGGCTGTTCTCGTCCGGCAGCCGGGCGTGGACCTTCGCCCCCGTCATCGCGCTGCCCCTCTTCGATGGCGGCCGCCGCCAGGCGAATCTGGAGTTGTCAGAGGTCCGCCGCCATATTGCCGTGGCGGAATACGAACAGCGCATCCAGACCGCCTTCCGGGAGGTCTCCGACGCCCTGTCCGCACGCCGCTGGCTGACCGAGCAGCGCGACCTGCAGCGCGCGGCGCTGACCACTTCGCGCGAACGTGCCCGACTGGCGCAACTGCGCTACGACAACGGCTCGGCCGCCTATCTGGAGGTGCTCGATGCCCAGCGCGTGTTGCTGGCTGCGGAGCAGCAGCTGGTCGAGGCCCGGCGCGCCCTGCTCTCGAATCAGGTGGCGCTGTACGCGGCGCTCGGCGGCGGCGCGCAATCGAACCCTGAGGGCGCTGCGGCGCCCGCTTTGGTCCCCGTGTCTCCCCGTTAA
PROTEIN sequence
Length: 522
MSHMPVCRPAASGSTGAPHDQNADARAGIASAARAKRTGWPWRHAMVAAAVGALCSGCASLAPQYDAPPSPVPDTWLDAAQGAQGHAASALAWNDYFTDPMLKRLIQTALDNNRDLRVALLRVEEVRAAYQIQRADLFPQVNAGAQGARARIPGDLNPSGGPVTGGEYRAEVGVSSWELDLWGRVRNLNEAALQQWLATQAGSRAARTALIAQVADTYLNVRDMNERVALARRTVETRQESFRIFNRRVEVGSTSRLDLMQVQTLLIQAQTLLAQLEQARAAQIHALGLLIGADPGPLPEAAPFDETLVLAELAPGLPSALLTARPDIVAAEHRLIAAHADIGAARAAFFPRIALTGSLGTASAELDGLFSSGSRAWTFAPVIALPLFDGGRRQANLELSEVRRHIAVAEYEQRIQTAFREVSDALSARRWLTEQRDLQRAALTTSRERARLAQLRYDNGSAAYLEVLDAQRVLLAAEQQLVEARRALLSNQVALYAALGGGAQSNPEGAAAPALVPVSPR*