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SCNpilot_BF_INOC_scaffold_1544

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1544_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22..1116)
DNA (1095bp) protein (365aa)
secretion protein HlyD family protein; K01993 HlyD family secretion protein id=12494311 bin=THIO_HI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secretion protein HlyD family protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KFJ11777.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
SCNpilot_BF_INOC_scaffold_1544_2
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1126..2691)
DNA (1566bp) protein (522aa)
NodT family RND efflux system outer membrane lipoprotein id=12494310 bin=THIO_HI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=THIO_HI organism_group=Betaproteobacteria
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EZP58166.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_BF_INOC_scaffold_1544_3
unknown

Not on your lists

comp(2688..2870)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1544_4
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2867..3037)
DNA (171bp) protein (57aa)
Putative type I restriction enzymeP M protein {ECO:0000313|EMBL:KFB76681.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFB76681.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus
hsdM1; type I restriction-modification system DNA methylase (EC:2.1.1.72)
Type I restriction-modification system DNA methylase n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHS2_PROFC
SCNpilot_BF_INOC_scaffold_1544_5
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3105..3614)
DNA (510bp) protein (170aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUR6_ACICS
Putative acetyltransferase {ECO:0000313|EMBL:KFB76680.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.
GCN5-like N-acetyltransferase
SCNpilot_BF_INOC_scaffold_1544_6
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3583..3894)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUR5_ACICS
Uncharacterized protein {ECO:0000313|EMBL:KFB76679.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1544_7
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4225..4725)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B1_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA85543.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24
TIR-like domain-containing protein (DUF1863)
SCNpilot_BF_INOC_scaffold_1544_8
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4728..5321)
DNA (594bp) protein (198aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
Putative queuosine biosynthesis protein queC n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B2_9RALS
7-cyano-7-deazaguanine synthase-related protein
SCNpilot_BF_INOC_scaffold_1544_9
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..6031)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003635CCD
Uncharacterized protein {ECO:0000313|EMBL:CCA85545.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24
thermostable 8-oxoguanine DNA glycosylase
SCNpilot_BF_INOC_scaffold_1544_10
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6028..7008)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00038273AF
Uncharacterized protein {ECO:0000313|EMBL:CCA85546.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24
hypothetical protein
SCNpilot_BF_INOC_scaffold_1544_11
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7005..7499)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A2B4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA85547.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24
hypothetical protein
SCNpilot_BF_INOC_scaffold_1544_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7513..8652)
DNA (1140bp) protein (380aa)
Restriction endonuclease S subunits-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLA9_9BURK
Restriction endonuclease S subunits-like protein {ECO:0000313|EMBL:EGJ09127.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax be
Type I restriction-modification system, specificity subunit S
SCNpilot_BF_INOC_scaffold_1544_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8649..9842)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002E27C27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36396.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
SCNpilot_BF_INOC_scaffold_1544_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9839..11668)
DNA (1830bp) protein (610aa)
SAM-dependent methyltransferase n=1 Tax=Acidovorax avenae RepID=UPI0003030F7D
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:GAD20369.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
N-6 DNA methylase
SCNpilot_BF_INOC_scaffold_1544_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11684..14092)
DNA (2409bp) protein (803aa)
DEAD/DEAH box helicase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FA7DA
Type I site-specific restriction-modification system {ECO:0000313|EMBL:GAD20370.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
Type I site-specific restriction-modification system, R (Restriction) subunit
SCNpilot_BF_INOC_scaffold_1544_16
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15089..15286
DNA (198bp) protein (66aa)
id=12497434 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497434 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_1544_17
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15595..16650
DNA (1056bp) protein (352aa)
replication initiation factor id=12497433 bin=THIO_MID species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
replication initiation factor
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
SCNpilot_BF_INOC_scaffold_1544_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16847..17869
DNA (1023bp) protein (341aa)
Phage integrase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H88_DECAR
Phage integrase
Phage integrase {ECO:0000313|EMBL:AAZ45793.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (stra
SCNpilot_BF_INOC_scaffold_1544_19
unknown

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comp(18083..18157)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 19 items

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