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SCNpilot_BF_INOC_scaffold_16097_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1497..1796)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ED53C similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 94.0
  • Bit_score: 181
  • Evalue 4.00e-43
trbD1; conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 167
  • Evalue 1.70e-39
Conjugal transfer protein TrbD {ECO:0000313|EMBL:CAP42551.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 167
  • Evalue 8.40e-39

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAACGCGGCTGGCATGAATGCGCCAACCACTAATACAGCGAGCTTCGCGAATGGCTTCGAGATTCCGCTGCATCGCTCGCTGACCGAACCGATTCTGCTGGGTGGCGCGCCGCGCACCGTGGCGATTGCCAACGGCACGCTGGCCGCGGCCGTTGGGCTCGGGCTGCAACTCTGGTTGCCCGGCATGGTGCTGTGGATCGTCGGGCACTCGCTGGCCGTGTGGGGCGCGCGAGTGGATGCGCAGTTCATGGCGGTCTTCGCTCGGCACATCAAGCACCGGCAGTTGCTGGACGTGTGA
PROTEIN sequence
Length: 100
MNAAGMNAPTTNTASFANGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWLPGMVLWIVGHSLAVWGARVDAQFMAVFARHIKHRQLLDV*