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SCNpilot_BF_INOC_scaffold_16097_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1793..1999)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZA3_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 3.10e-26
conjugal transfer protein Trbc similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 8.60e-27
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AEF22100.1}; Flags: Precursor;; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 124
  • Evalue 4.30e-26

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Taxonomy

Pseudomonas fulva → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
TCCCTGCTGGACTCGATCCAGGGGCCGGTGGCCAGGATCATCGCGGTGATCATCATCATTACCACCGGCTTGACGCTGGCGTTCGGCGACACCAGCGGAGGCTTTCGCAAGCTGGTGCAGATCGTGTTCGGCCTGTCGATCGCGTTCGCCGCATCGTCGTTCTTCCTGACCTTCTTCAGCTTCACGGGTGGAGCGGTGATCGCATGA
PROTEIN sequence
Length: 69
SLLDSIQGPVARIIAVIIIITTGLTLAFGDTSGGFRKLVQIVFGLSIAFAASSFFLTFFSFTGGAVIA*