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SCNpilot_BF_INOC_scaffold_1661_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 2126..3967

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Thiobacillus thioparus RepID=UPI00037367BF similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 613.0
  • Bit_score: 1178
  • Evalue 0.0
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 613.0
  • Bit_score: 1145
  • Evalue 0.0
carbamoyl-phosphate synthase L chain, ATP-binding similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 612.0
  • Bit_score: 1137
  • Evalue 0.0

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
GTGGAGGCGGAAGCGCGCCGCACCCAGCTGAAGAACCTCATCATCCTCGGCAAGGAACGGGGGTTCCTGACTTACGCCGAGATCAACGACCACCTGCCCGACGAGGTGTTGGACGCCGACCAGATCGAAGGCGTGATCAGCATGATCAACGACATGGGCATCCAGGTCTACGATGAAGCGCCGGACGCCGAAACCCTGCTGATGCAGGAAGCCGCCCCTGCCGTCGCCGACGAGGATGTCGTTGCGGAAGCCGAGCAGGCGCTGACCACGGTCGATTCTGAATTCGGCCGCACGACTGATCCGGTCCGTATGTACATGCGTGAAATGGGCTCGGTCGATCTGTTGACGCGCGAAGGCGAAATCGAGATCGCCAAGCGCATCGAGGAAGGCCTGCGCCACATGGTGCAGGCGATTTCGTCGTGTCCGCTCACCATCCAGCAAATCCTGGACATGGCGGCGCAGGTCGAAAAAGACGAGATGCGCATTGACGAGCTGATCGATGGCTTCGTCGAAATGGAAACCGAAGCCGCGGCTGAAGAGGAAGACACGTCCGCCGACGAAGAAGATACGGACGAGGACGACGACGAAGAAGCCAGCGCCAAGCTCGCAGCCGCCAATCTGGCGCAGCTCAAAGCCGAAGCGCTTGTGCAGTTTGACTTCATCCGCAAAGCCTACAAAAAAGCACAGACAGCCCATGCCAAGTATGGCCTCGGCAGTCCGCAGCACATGAAAACCCAGTCCGAAGTCACCGAGCTGCTGATGGCGATCCGCTTCTCGGTGCGCCAGGTGGATAACCTGTGCGAGCAGATCCGCAGTGCGGTGGAAGAGGTGCGCTCGCACGAACGCAAGATCATGGAGTTCTGCGTCACCCGTTCGGGCATGCCGCGTCCGCACTTCATCAAGGCTTTCCCCGGCAATGAAACCAACCTGACGTGGCTGGACCGGGAGATCGCTGCGAAGAAAGCCTACTGCTCGACGCTTTCCAAGGTGCAATACGAGGTCAAGGCACACCAGGAAGCCCTGATCGCGATGCAGGATCGTGTCGGTCTGCCGATCAAGAACCTGAAGGACATCAACAAGCAGATGTCGACCGGCGAAGCCAAGGCCCGCCGTGCCAAGCGCGAGATGATCGAGGCCAACCTGCGCCTGGTGATTTCGATCGCCAAGAAATACACCAATCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAAGCCGTGGACAAGTTCGAGTATCGCCGCGGCTACAAATTCTCGACCTATGCCACCTGGTGGATTCGCCAGGCGATCACGCGTTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGATGAACCGGATCAGCCGCCAGATCCTGCAGGAAACCGGCATCGAGCCCGACCCGGCGACGCTGGCAATCAAGATGGAAATGCCGGAAGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATTTCCATGGAAACGCCGATCGGCGACGACGAGGATTCCCACCTCGGCGACTTCATCGAGGACTCCAGCACGCTGTCGCCTGACGACTCCGCGATCTACGCAAACCTGCGCGACGCTACCCGCGAAGTGCTGGACAGCCTGACCTCGCGCGAAGCCAAGGTATTGCGCATGCGCTTCGGCATCGAAATGAACACCGACCACACGCTGGAAGAAGTCGGCAAGCAATTCGACGTCACGCGTGAGCGGATCCGCCAGATCGAAGCCAAGGCCCTGCGCAAGCTGCGCCACCCGACCCGCTCCGAGAAGTTGAAAAGCTTTACCGGCAGCGGCGAAGTGTAA
PROTEIN sequence
Length: 614
VEAEARRTQLKNLIILGKERGFLTYAEINDHLPDEVLDADQIEGVISMINDMGIQVYDEAPDAETLLMQEAAPAVADEDVVAEAEQALTTVDSEFGRTTDPVRMYMREMGSVDLLTREGEIEIAKRIEEGLRHMVQAISSCPLTIQQILDMAAQVEKDEMRIDELIDGFVEMETEAAAEEEDTSADEEDTDEDDDEEASAKLAAANLAQLKAEALVQFDFIRKAYKKAQTAHAKYGLGSPQHMKTQSEVTELLMAIRFSVRQVDNLCEQIRSAVEEVRSHERKIMEFCVTRSGMPRPHFIKAFPGNETNLTWLDREIAAKKAYCSTLSKVQYEVKAHQEALIAMQDRVGLPIKNLKDINKQMSTGEAKARRAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGIEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDSSTLSPDDSAIYANLRDATREVLDSLTSREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSEKLKSFTGSGEV*