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SCNpilot_BF_INOC_scaffold_1661

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1661_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..196
DNA (195bp) protein (65aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI00036783EB
hypothetical protein; K09117 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1661_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239..1933
DNA (1695bp) protein (565aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=GWE1_Thiobacillus_62_9_curated
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FC31F
SCNpilot_BF_INOC_scaffold_1661_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2126..3967
DNA (1842bp) protein (614aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thiobacillus thioparus RepID=UPI00037367BF
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor Tax=GWE1_Thiobacillus_62_9_curated
carbamoyl-phosphate synthase L chain, ATP-binding
SCNpilot_BF_INOC_scaffold_1661_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..4719
DNA (585bp) protein (195aa)
slmA, ttk; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Possible Transcriptional Regulator, TetR family id=1320208 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
slmA; nucleoid occlusion protein
SCNpilot_BF_INOC_scaffold_1661_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4707..5477)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373617C
adenylyltransferase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
adenylyltransferase
SCNpilot_BF_INOC_scaffold_1661_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5481..5876)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CA894
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1661_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5960..7372)
DNA (1413bp) protein (471aa)
peptidase S41A, protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
peptidase S41A, protease (EC:3.4.21.102)
peptidase S41 n=1 Tax=Thiobacillus thioparus RepID=UPI00036535CB
SCNpilot_BF_INOC_scaffold_1661_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7374..8621)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E0A0
M23 family peptidase Tax=GWE1_Thiobacillus_62_9_curated
M23 family peptidase
SCNpilot_BF_INOC_scaffold_1661_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8651..10192)
DNA (1542bp) protein (514aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=GWE1_Thiobacillus_62_9_curated
phosphoglyceromutase (EC:5.4.2.1)
phosphoglyceromutase n=1 Tax=Thiobacillus thioparus RepID=UPI000373966B
SCNpilot_BF_INOC_scaffold_1661_10
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10711..13836)
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D7DC3
cusA; RND family outer membrane copper/silver/drug transport protein Tax=RBG_16_Betaproteobacteria_56_24_curated
cusA; RND family outer membrane copper/silver/drug transport protein
SCNpilot_BF_INOC_scaffold_1661_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13839..15155)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036196B9
heavy metal efflux system protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heavy metal efflux system protein
SCNpilot_BF_INOC_scaffold_1661_12
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

Not on your lists

comp(15213..15506)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362F0F8
Efflux transporter, RND family, MFP subunit Tax=MPI_Marinimicrobia_46_47
SCNpilot_BF_INOC_scaffold_1661_13
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15584..16519)
DNA (936bp) protein (312aa)
nitrite reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003825B58
aniA; multicopper oxidase type 1
Multicopper oxidase type 1 {ECO:0000313|EMBL:CAD84835.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas
SCNpilot_BF_INOC_scaffold_1661_14
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16534..16926)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038167E8
cytochrome c, class IC:cytochrome c, class I
Cytochrome c, class IC:Cytochrome c, class I {ECO:0000313|EMBL:CAD84836.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" sou
SCNpilot_BF_INOC_scaffold_1661_15
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17594..18649)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E9DEE
multicopper oxidase type 1
Putative multicopper oxidase {ECO:0000313|EMBL:CAL63355.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimona
SCNpilot_BF_INOC_scaffold_1661_16
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18848..19333
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037243AC
HTH-type transcriptional regulator nsrR
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:BAP89763.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.
SCNpilot_BF_INOC_scaffold_1661_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19537..20577
DNA (1041bp) protein (347aa)
RND transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003631395
secretion protein HlyD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secretion protein HlyD
SCNpilot_BF_INOC_scaffold_1661_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20590..23808
DNA (3219bp) protein (1073aa)
multidrug transporter AcrB n=1 Tax=Thiobacillus thioparus RepID=UPI0003762541
acriflavin resistance protein Tax=GWE1_Thiobacillus_62_9_curated
acriflavin resistance protein
SCNpilot_BF_INOC_scaffold_1661_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23805..24023
DNA (219bp) protein (73aa)
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036FA446
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1661_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24033..24446
DNA (414bp) protein (138aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003690547
rhodanese-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rhodanese-like protein
SCNpilot_BF_INOC_scaffold_1661_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24467..24730
DNA (264bp) protein (88aa)
glutaredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI0003631F7F
glutaredoxin, GrxC; K03676 glutaredoxin 3 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutaredoxin, GrxC
SCNpilot_BF_INOC_scaffold_1661_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24814..25242
DNA (429bp) protein (143aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI0003773904
thioredoxin
SCNpilot_BF_INOC_scaffold_1661_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25359..25814
DNA (456bp) protein (152aa)
preprotein translocase subunit SecB n=1 Tax=Thiobacillus thioparus RepID=UPI000367B31B
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
preprotein translocase subunit SecB
SCNpilot_BF_INOC_scaffold_1661_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25831..26283
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AEC89
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1661_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26280..27266
DNA (987bp) protein (329aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWE1_Thiobacillus_62_9_curated
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035EF190
SCNpilot_BF_INOC_scaffold_1661_26
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27461..31123
DNA (3663bp) protein (1221aa)
hypothetical protein id=12493753 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1661_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31141..32853)
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363693B
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; K03776 aerotaxis receptor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
SCNpilot_BF_INOC_scaffold_1661_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33093..33272)
DNA (180bp) protein (60aa)
RNA methyltransferase CspR; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000367C4FB
RNA methyltransferase CspR
SCNpilot_BF_INOC_scaffold_1661_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33559..34866
DNA (1308bp) protein (436aa)
glutamate--cysteine ligase GshA; K01919 glutamate--cysteine ligase [EC:6.3.2.2] Tax=GWE1_Thiobacillus_62_9_curated
glutamate--cysteine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI0003687038
glutamate--cysteine ligase GshA
SCNpilot_BF_INOC_scaffold_1661_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34863..35699
DNA (837bp) protein (279aa)
glutathione synthase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] Tax=GWE1_Thiobacillus_62_9_curated
glutathione synthase (EC:6.3.2.3)
glutathione synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003644098
Displaying 30 items

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