ggKbase home page

SCNpilot_BF_INOC_scaffold_2120_10

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(12399..13700)

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 425.0
  • Bit_score: 804
  • Evalue 1.00e-229
4Fe-4S ferredoxin id=5082510 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 427.0
  • Bit_score: 544
  • Evalue 1.30e-151
4Fe-4S ferredoxin similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 436.0
  • Bit_score: 539
  • Evalue 1.20e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGGACTTAACAACAATCCTTATTTACCTTGCGCCTTTGGCAGTCGTTCTTTTTCTCTATTTCCGCCGGCGCCAGTTGCGCAATGAACAGCATGCGCTGGCGCTACAGGAATCCAGGGCGGCCGGCCTGGGAGAGCCTGTTTCGCTGCACCCTGTGTTCGATCCGCTCCGGTGCATTGGATCCGGCTCATGCGTCAAGGCCTGTCCCGAAGGCGCGCTCGGGCTCGTGGAGGGCAAGGCCCATCTGGTCAATCCGTCGGTTTGCATCGGCCATGGCGCCTGCATGGCCTCCTGCCCCTTCGAGGCCATTAAGCTGGTGTTTGGGACGGAAAAACGCGGGATCGACATCCCGCTCGTCAAACCCAATTTCGAAACCAACATCCCCGGGTTGTTCATTGCCGGCGAATTGGGGGGAATGGGTCTCGTGCGGAAGGCCGCCGAACAGGGGCGTCAAGCGATGAACGCCATCAAGGACAAGATCAAGGGGGAGCGGGACGCCGAACTGGATGTACTCATCGTGGGCGCAGGTCCGGCGGGAATCGCGGCCGGGCTGGGCGCAATCCAGCACAAGCTGCGCTACCGGATCGTGGAACAGGAGGATTCGTTGGGCGGCACGGTTTATCACTATCCGCGCAACAAGGTCATCATGACTGCCCCAGTCCAGTTGCCGATCGTCGGCAAGGTCAGGATGTCGGAAATCAGCAAGGAAGCCTTGCTCGAATTCTGGAATGGCATCGTAGGCAAGACAGACCTGAAAATCAGCTTCCGGGAACGCATGGAAAGCATTGAATCGAGCGGCCGGGGCTTCAAGGTCAAAACCTCAGGAGGAGAATATTCAGCCCGCGCGGTACTGTTGGCCATCGGACGGCGCGGCACGCCCCGCAAGCTGGACGTCCCCGGCGAAGAATTGCCCAAAGTGGTTTACCGATTGATCGATCCCGAGCAATACCGGGGCCAGAAGGTACTGGTCATCGGTGGCGGCGACAGCGCATTGGAAGCGGCACTTGCCATCGCCGCAGAACCGGATACCACTGTGGCACTATCCTATCGGGGCGACGCCTTCGGCCGGGTCAAGCCGAAAAATCGCCAGCGCCTGGATGAAGCCCAGAAAACCGGCCGCATCACTGTCTTGCTCAAATCGAATGTGGTACGGATCGAACCCGGGGAGGTGCTGCTGGAGGCAGCATCCGGAGAGATTGCCCTGCCAAATGACATCGTCATCATTTCTGCTGGCGGCGTACTGCCCATCGATCTGCTGAAGACAGTCGGCATCCAGTTTGAAACCAAACATGGAACAGAATAG
PROTEIN sequence
Length: 434
MDLTTILIYLAPLAVVLFLYFRRRQLRNEQHALALQESRAAGLGEPVSLHPVFDPLRCIGSGSCVKACPEGALGLVEGKAHLVNPSVCIGHGACMASCPFEAIKLVFGTEKRGIDIPLVKPNFETNIPGLFIAGELGGMGLVRKAAEQGRQAMNAIKDKIKGERDAELDVLIVGAGPAGIAAGLGAIQHKLRYRIVEQEDSLGGTVYHYPRNKVIMTAPVQLPIVGKVRMSEISKEALLEFWNGIVGKTDLKISFRERMESIESSGRGFKVKTSGGEYSARAVLLAIGRRGTPRKLDVPGEELPKVVYRLIDPEQYRGQKVLVIGGGDSALEAALAIAAEPDTTVALSYRGDAFGRVKPKNRQRLDEAQKTGRITVLLKSNVVRIEPGEVLLEAASGEIALPNDIVIISAGGVLPIDLLKTVGIQFETKHGTE*