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SCNpilot_BF_INOC_scaffold_2120

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2120_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1141
DNA (1140bp) protein (380aa)
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (EC:2.7.1.25 2.7.7.4); K00958 sulfate adenylyltransferase [EC:2.7.7.4] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curat
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003728723
SCNpilot_BF_INOC_scaffold_2120_2
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1185..2714
DNA (1530bp) protein (510aa)
sulfotransferase id=12493064 bin=THIO_HI species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:AEG01091.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (
SCNpilot_BF_INOC_scaffold_2120_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2739..4562)
DNA (1824bp) protein (608aa)
sulfotransferase id=12493065 bin=THIO_HI species=Fodinicurvata sediminis genus=Fodinicurvata taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfotransferase Tax=RBG_16_Planctomycetes_64_12_curated
Conserved protein of unknown function. Containing two TPR domains and one sulfotransferase domain
SCNpilot_BF_INOC_scaffold_2120_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4654..6300)
DNA (1647bp) protein (549aa)
sulfotransferase id=12493065 bin=THIO_HI species=Fodinicurvata sediminis genus=Fodinicurvata taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfotransferase Tax=RBG_16_Planctomycetes_64_12_curated
Conserved protein of unknown function. Containing two TPR domains and one sulfotransferase domain
SCNpilot_BF_INOC_scaffold_2120_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6388..7188)
DNA (801bp) protein (267aa)
hypothetical protein id=12493066 bin=THIO_HI species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2120_6

Not on your lists

comp(7507..8958)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F7775
Sodium/pantothenate symporter {ECO:0000313|EMBL:CBI11775.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sodium/solute symporter
SCNpilot_BF_INOC_scaffold_2120_7
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8970..9731)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RBJ5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EGK72166.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatili
hypothetical protein
SCNpilot_BF_INOC_scaffold_2120_8
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10047..11450)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KTL2_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL63675.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylp
SCNpilot_BF_INOC_scaffold_2120_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11447..12307)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SGV0_HAHCH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2120_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12399..13700)
DNA (1302bp) protein (434aa)
4Fe-4S ferredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
4Fe-4S ferredoxin id=5082510 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_2120_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13921..14829
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003761C78
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2120_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14870..16768
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000382AC1B
cytochrome c family protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_2120_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17104..18081)
DNA (978bp) protein (326aa)
Tax=CG_Rhodocyc_01
SCNpilot_BF_INOC_scaffold_2120_14
Uliginosibacterium gangwonense, Uliginosibacterium, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18484..18696)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003641A73
SCNpilot_BF_INOC_scaffold_2120_15
unknown

Not on your lists

comp(18998..19756)
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2120_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19892..20239
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=1274748 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
cytochrome C family protein
SCNpilot_BF_INOC_scaffold_2120_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20328..22778
DNA (2451bp) protein (817aa)
sporulation domain-containing protein id=5082500 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sporulation domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
sporulation domain-containing protein
SCNpilot_BF_INOC_scaffold_2120_18
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22804..23424
DNA (621bp) protein (207aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Heme exporter protein CcmA n=2 Tax=Allochromatium vinosum RepID=D3RVT2_ALLVD
heme exporter protein CcmA
SCNpilot_BF_INOC_scaffold_2120_19
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23437..24105
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJQ3_9PROT
heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
heme exporter protein CcmB
SCNpilot_BF_INOC_scaffold_2120_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24149..24889
DNA (741bp) protein (247aa)
Heme exporter protein CcmC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADK5_9PROT
heme exporter protein CcmC Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
heme exporter protein CcmC
SCNpilot_BF_INOC_scaffold_2120_21
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24886..25080
DNA (195bp) protein (65aa)
Heme exporter protein CcmD n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEX9_NITSI
heme exporter protein CcmD; K02196 heme exporter protein D Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
heme exporter protein CcmD
SCNpilot_BF_INOC_scaffold_2120_22
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25064..25537
DNA (474bp) protein (158aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSA2_9PROT
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
CcmE/CycJ protein
SCNpilot_BF_INOC_scaffold_2120_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25534..25998
DNA (465bp) protein (155aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q9_NITMU
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
cytochrome c-type biogenesis protein CcmF
Displaying 23 items

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