ggKbase home page

SCNpilot_BF_INOC_scaffold_1856_26

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 26125..26763

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=12493945 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 213.0
  • Bit_score: 416
  • Evalue 1.60e-113
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_cura similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 212.0
  • Bit_score: 394
  • Evalue 9.00e-107
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 212.0
  • Bit_score: 366
  • Evalue 4.00e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCAGGCTTTCACTGTTCTCGACGGGCTGGTGGCGCCGCTCGACCGCGCCAACGTCGACACCGACGCCATCATCCCCAAGCAGTTCCTGAAGTCGATCAAGCGCGCCGGCTTCGGCCCCAACTTGTTCGACGAATGGCGGTATCTCGACCACGGCGAGCCCGGCAAGTCGAATCACGATCGTCCGCTGAATACGGAATTCGTGCTGAACCAGCCACGTTACCAAGGGGCGTCGGTGCTGCTGGCACGCGAGAATTTTGGTTGCGGTTCCAGCCGCGAGCATGCGCCGTGGGCGCTGGAAGACTACGGGTTCCGCGCCATCATCGCCCCGAGCTTTGCGGATATTTTCTACAACAATTGCTTCAAGAACGGCATCCTGCCCATCGTGCTCGACGCCCAGATCGTGGATCGCCTGTTTCGCGAGTGCGGCACGAGCGAGGGCTACGCCCTGACTGTCGATCTGGACAAGCAGACGGTAACGACGCCCACGGGCGAAACGATCCCTTTCGAGGTGGATGCGGGACGCAAGCACCGCCTGCTCAATGGACTGGACGATATCGGCCTGACCTTGCTGCAGGCCGACAAGATCAAGGCCTATGAGGAACGGCGCAAACAGGATGCCCCGTGGCTCTTTGCTTGA
PROTEIN sequence
Length: 213
MQAFTVLDGLVAPLDRANVDTDAIIPKQFLKSIKRAGFGPNLFDEWRYLDHGEPGKSNHDRPLNTEFVLNQPRYQGASVLLARENFGCGSSREHAPWALEDYGFRAIIAPSFADIFYNNCFKNGILPIVLDAQIVDRLFRECGTSEGYALTVDLDKQTVTTPTGETIPFEVDAGRKHRLLNGLDDIGLTLLQADKIKAYEERRKQDAPWLFA*