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SCNpilot_BF_INOC_scaffold_1856

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1856_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..421
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000375FF30
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

742..1116
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381813F
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1183..2094
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037367CE
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2240..3562
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003804B48
diguanylate cyclase
Putative diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:AAZ97906.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" so
SCNpilot_BF_INOC_scaffold_1856_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3565..4026
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379CA1A
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cold-shock DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1856_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4052..5386)
DNA (1335bp) protein (445aa)
putative lipoprotein id=12493930 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABE46139.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain
SCNpilot_BF_INOC_scaffold_1856_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5411..5881)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003623798
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5888..8089)
DNA (2202bp) protein (734aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000379831A
ABC transporter transmembrane region Tax=CG_Beta_01
ABC transporter transmembrane region
SCNpilot_BF_INOC_scaffold_1856_9
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8426..10615
DNA (2190bp) protein (730aa)
cyanophycin synthetase (EC:6.3.2.-) Tax=CG_Beta_01
cyanophycin synthetase (EC:6.3.2.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373762D
SCNpilot_BF_INOC_scaffold_1856_10
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..13241
DNA (2571bp) protein (857aa)
cphA1; cyanophycin synthetase CphA (EC:6.3.2.29 6.3.2.30)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000375DB1D
Cyanophycin synthetase {ECO:0000313|EMBL:ESJ02415.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC
SCNpilot_BF_INOC_scaffold_1856_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13404..14339
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377EDA8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..14952
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037240A9
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14997..16235
DNA (1239bp) protein (413aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z108_9GAMM
Na+/H+ antiporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Na+/H+ antiporter
SCNpilot_BF_INOC_scaffold_1856_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16450..17697
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377CC87
Chloride channel protein {ECO:0000313|EMBL:GAO35296.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
Cl-channel voltage-gated family protein
SCNpilot_BF_INOC_scaffold_1856_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17759..18013
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EE760
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18010..18774
DNA (765bp) protein (255aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
merA; mercuric reductase (EC:1.16.1.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D9EF1
SCNpilot_BF_INOC_scaffold_1856_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18923..19747
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1C3B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19774..20613)
DNA (840bp) protein (280aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CB8DD
cobyrinic acid a,c-diamide synthase; K04562 flagellar biosynthesis protein FlhG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cobyrinic acid a,c-diamide synthase
SCNpilot_BF_INOC_scaffold_1856_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20610..21404)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B061B
diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_1856_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21693..22064)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037770C5
putative dissimilatory sulfite reductase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dissimilatory sulfite reductase
SCNpilot_BF_INOC_scaffold_1856_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22269..22547)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003755BFC
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_1856_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22600..23250
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382ACE9
flavin reductase-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flavin reductase-like protein
SCNpilot_BF_INOC_scaffold_1856_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23382..24545
DNA (1164bp) protein (388aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000379BEA1
putative transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transporter
SCNpilot_BF_INOC_scaffold_1856_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24570..25988
DNA (1419bp) protein (473aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
isopropylmalate isomerase large subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI000382437C
SCNpilot_BF_INOC_scaffold_1856_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25972..26124
DNA (153bp) protein (51aa)
Putative small secreted protein Tax=GWE1_Thiobacillus_62_9_curated
putative small secreted protein id=12493944 bin=THIO_HI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_1856_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26125..26763
DNA (639bp) protein (213aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=12493945 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_cura
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
SCNpilot_BF_INOC_scaffold_1856_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26822..27883
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037112FE
SCNpilot_BF_INOC_scaffold_1856_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27957..29069
DNA (1113bp) protein (371aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000374F496
SCNpilot_BF_INOC_scaffold_1856_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29200..31629
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A9257
hypothetical protein; K08086 pilus assembly protein FimV Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1856_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31622..32236
DNA (615bp) protein (205aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493949 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Displaying items 1-30 of 36 in total

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