ggKbase home page

SCNpilot_BF_INOC_scaffold_1856_31

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 32249..33028

Top 3 Functional Annotations

Value Algorithm Source
truA, hisT; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 259.0
  • Bit_score: 508
  • Evalue 5.20e-141
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 259.0
  • Bit_score: 449
  • Evalue 7.60e-124
tRNA pseudouridine synthase A n=1 Tax=Thiobacillus thioparus RepID=UPI0003609AA0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 259.0
  • Bit_score: 514
  • Evalue 6.80e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCGTATCGTATTGGGTCTGGAATATTGCGGCATCGGCTTTTGCGGCTGGCAGTCGCAGCCGCAGGGGTGTGGCGTGCAGGACGCACTGGAAGCGGCCGTGTCGGCGATTGCCGGCGAAAAGACCATCGTCACCGCGGCCGGACGTACCGATACCGGCGTGCATGCGGCATTCCAGGTCGCACATTTCGACACGCCGGCCCAGCGCCCGCTTACGGCCTGGGTGCGTGGCGTCAATAGTCATCTTCCGTCCGGCGTGGCGGTGTTGTGGGCACGCGAGGTGGGCGGAGATTTCCATGCGCGTTTCGCCGCCACACAGCGGGGCTACCGCTATGTGCTGCTGAATCACCCGGTGCGGCCCGGTCTCAATCACGGGCTGATCGGCTGGCATCATCGTCCGCTCGACGCTGACGCGATGAACCGGGCGACGACGCACCTGATCGGTCGGCACGATTTTTCCGCTTTTCGTGCCGCCGAGTGCCAGGCCAAGTCGCCGGTCAAGGAACTGCGGCTGGCGCAGATCGAGCGGCGCGGCGATTTTCTGTTGTGTGATTTCCGTGCCGACGGTTTCCTGCACCACATGGTGCGCAACCTCATGGGCTGCCTGGTTCATATCGGTGTCGGCATGCAGTCGCCCGAATGGATGGGCGAGATTCTGCAAAGCCGCGACCGCACGCTGGCAGCGCCCACTTTCGACGCCGCCGGACTGTACCTGACCCACATCCGGTATCCTGCGCACTTTGCTTTGCCGGAAAGCTCTGAACGATGGCCGTTCGCGTAA
PROTEIN sequence
Length: 260
MRIVLGLEYCGIGFCGWQSQPQGCGVQDALEAAVSAIAGEKTIVTAAGRTDTGVHAAFQVAHFDTPAQRPLTAWVRGVNSHLPSGVAVLWAREVGGDFHARFAATQRGYRYVLLNHPVRPGLNHGLIGWHHRPLDADAMNRATTHLIGRHDFSAFRAAECQAKSPVKELRLAQIERRGDFLLCDFRADGFLHHMVRNLMGCLVHIGVGMQSPEWMGEILQSRDRTLAAPTFDAAGLYLTHIRYPAHFALPESSERWPFA*