ggKbase home page

SCNpilot_BF_INOC_scaffold_2071_10

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(7622..7978)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Thiobacillus thioparus RepID=UPI00036CCA68 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 237
  • Evalue 9.60e-60
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 3.30e-58
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 1.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCTCGTATTGCTGGGGTTAATATCCCGAATCATCAACACGCGGTTATTGCGTTGACCGCCATTTACGGTATCGGCCGGACCACCTCCGGCAAGATTTGCGACGCGACGGGTGTTGCCCGTACGTCCAAAATCAAGGACCTGTCCGAAGCCGAAATGGAGCGCTTGCGTGAAGGCGTGGCCAAGTTCACGGTCGAGGGCGACCTGCGCCGTGAAATTACCATGAACATCAAGCGTTTGATGGATCTTGGCTGCTACCGTGGCTTCCGCCATCGCAAGGGTTTGCCAGTCCGTGGTCAGCGCACCCGTACCAATGCGCGTACCCGCAAGGGCCCGCGCAAGGCCATCAAAAAGTAA
PROTEIN sequence
Length: 119
MARIAGVNIPNHQHAVIALTAIYGIGRTTSGKICDATGVARTSKIKDLSEAEMERLREGVAKFTVEGDLRREITMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNARTRKGPRKAIKK*