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SCNpilot_BF_INOC_scaffold_2071

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2071_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1643
DNA (1641bp) protein (547aa)
excinuclease ABC subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI00036C33A3
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
SCNpilot_BF_INOC_scaffold_2071_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1645..2379
DNA (735bp) protein (245aa)
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-); K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=GWE1_Thiobacillus_62_9_curated
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-)
RNA pseudouridylate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81E1
SCNpilot_BF_INOC_scaffold_2071_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2500..2802
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003781DC5
lipoprotein Tax=GWE1_Thiobacillus_62_9_curated
lipoprotein
SCNpilot_BF_INOC_scaffold_2071_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2922..4187
DNA (1266bp) protein (422aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=GWE1_Thiobacillus_62_9_curated
hydroxypyruvate reductase (EC:1.1.1.81)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BC87A
SCNpilot_BF_INOC_scaffold_2071_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4207..4935)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368736D
hypothetical protein; K09134 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2071_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5091..5480)
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036728B3
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L17
SCNpilot_BF_INOC_scaffold_2071_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5565..6545)
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=12498468 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
SCNpilot_BF_INOC_scaffold_2071_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6575..7204)
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWE1_Thiobacillus_62_9_curated
rpsD; 30S ribosomal protein S4
SCNpilot_BF_INOC_scaffold_2071_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7220..7612)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS11_THIDA
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_2071_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7622..7978)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Thiobacillus thioparus RepID=UPI00036CCA68
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_2071_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8059..8172)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Thiomonas RepID=D5X638_THIK1
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpmJ; 50S ribosomal protein L36
SCNpilot_BF_INOC_scaffold_2071_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8216..8434)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 1 n=2 Tax=Thiobacillus RepID=IF11_THIDA
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_2071_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8434..9747)
DNA (1314bp) protein (438aa)
preprotein translocase subunit SecY n=1 Tax=Thiobacillus thioparus RepID=UPI00037717CB
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophila
SCNpilot_BF_INOC_scaffold_2071_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9766..10200)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CAF86
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L15
SCNpilot_BF_INOC_scaffold_2071_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10201..10386)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thiobacillus thioparus RepID=UPI00036E5014
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpmD; 50S ribosomal protein L30
SCNpilot_BF_INOC_scaffold_2071_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10390..10905)
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Thiobacillus thioparus RepID=UPI00036B46EC
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
SCNpilot_BF_INOC_scaffold_2071_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10921..11274)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thiobacillus thioparus RepID=UPI000363996E
50S ribosomal protein L18P; K02881 large subunit ribosomal protein L18 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
50S ribosomal protein L18
SCNpilot_BF_INOC_scaffold_2071_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11291..11518)
DNA (228bp) protein (76aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12495308 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplF; 50S ribosomal protein L6
Displaying 18 items

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