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SCNpilot_BF_INOC_scaffold_2884_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 172..1395

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=1 Tax=Thiobacillus thioparus RepID=UPI00037135CB similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 406.0
  • Bit_score: 773
  • Evalue 9.80e-221
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 407.0
  • Bit_score: 738
  • Evalue 6.40e-210
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 407.0
  • Bit_score: 724
  • Evalue 1.50e-206
  • rbh

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGGCTACAGCGGCAAAAGCAGTCAAGGACGCCACCTTCCTGTGGGAAGGGATGGACAAGCGCGGCAAGAAGATCAAGGGCCAGATGCAGGCCGGCGGCGAGGCCGTGGTCAATTCCCAGTTGCGCAAGCAGGGCATTACCGTCACCAAGGTCAAGAAGCAGAGTGCCCTGTTCAGCGGCGCCAAGAAAATCACCGACAAGGATGTCACGCTGTTCACCCGTCAACTGGCCACCATGATGAAGGCAGGCGTGCCCTTGCTGCAATCCTTCGAAATCGTGGCGCGCGGGCACTCCAATCCTTCGATGCAGCGCCTGCTGATGGAAATCAAGGCGGACATCGAAAAGGGCAGTAGCCTGACGCAGGCGTTCGGACGCCACCCCCTGTATTTCGACGCGCTGTTCTGCAACTTGGTCGGGGCGGGCGAGTCGGCCGGTATTCTCGAAGGCGTGCTCGACCGTCTCGCGATCTACAAGGAAAAGATTCTTGCCATCAAGAGCAAGATCAAATCGGCTCTTTTCTACCCGGTATCCATCATCGTGGTGGCGTTTGTCATCACGGCCATCATCATGATTTTCGTGATTCCCGCGTTCAAGGAACTGTTCAGCAGCTTTGGTGCAGATCTGCCGGGGCCGACCTTGGTGGTTATGGCGATATCGGATTATTTCGTCAAATGGTGGTGGGCGATTTTTGGTGGGATCGGCGGTGGACTGTATGCTTTTTTCCAGGCTTGGAGGCGTTCGCGCAAGGTACAGATGTTCATGGATCGCCTTGTACTCAAGCTGCCGATTTTCGGACCGGTCATCGAGAAGGCCACCATCGCGCGCTGGACGCGCACGCTGGCAACCATGTTTGCGGCGGGCGTGCCGCTGGTTGAAGCCTTGGAATCGGTCGGTGGCGCGTCGGGTAACCAGGTATTCGTTGAGGCCACCCATAAAATCCGCGGCGAAGTGGCGACCGGCACGGCATTGACCGTGGCGATGCAGAATTCCGGACGTTTCCCCAACATGGTGCTACAGATGGCAGCCATCGGCGAGGAATCCGGCTCGCTCGATTCCATGCTGGGCAAGGTGGCCGATTTTTACGAAGCCGAGGTCGACGACGCGGTCGAAGCGCTGTCGAGCCTGATGGAGCCGATCATCATGGTGGTGCTGGGTACCCTTATCGGTGGCATGGTGATCGCCATGTACCTGCCGATCTTCAAGATGGGCCAGGTTGTAGGGTGA
PROTEIN sequence
Length: 408
MATAAKAVKDATFLWEGMDKRGKKIKGQMQAGGEAVVNSQLRKQGITVTKVKKQSALFSGAKKITDKDVTLFTRQLATMMKAGVPLLQSFEIVARGHSNPSMQRLLMEIKADIEKGSSLTQAFGRHPLYFDALFCNLVGAGESAGILEGVLDRLAIYKEKILAIKSKIKSALFYPVSIIVVAFVITAIIMIFVIPAFKELFSSFGADLPGPTLVVMAISDYFVKWWWAIFGGIGGGLYAFFQAWRRSRKVQMFMDRLVLKLPIFGPVIEKATIARWTRTLATMFAAGVPLVEALESVGGASGNQVFVEATHKIRGEVATGTALTVAMQNSGRFPNMVLQMAAIGEESGSLDSMLGKVADFYEAEVDDAVEALSSLMEPIIMVVLGTLIGGMVIAMYLPIFKMGQVVG*