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SCNpilot_BF_INOC_scaffold_736_21

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 17289..18074

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=2 Tax=Burkholderia cenocepacia RepID=T0EEK9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 220.0
  • Bit_score: 120
  • Evalue 2.20e-24
putative conjugative transfer protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 220.0
  • Bit_score: 120
  • Evalue 6.20e-25
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:ERI28612.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bur similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 220.0
  • Bit_score: 120
  • Evalue 3.10e-24

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Taxonomy

Burkholderia cenocepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGCGACGGTTTTTGCCCCGGCATCTCTCGGCCCCTGATTTGCGTCGCATATGGCGCGGTGTGTGCTGGGCCTATCGCCAGTTCGCGATCTTTCTGTTCGTGGTTTTTCTGTGCTTCACGGCGGTCGCCTGGTGGCGCGGTGCGCACGCTACCGGCCCCGGCCCGGCCGTCCCGTCCGATGCGGCGATCGAGAAGGCCATGGCCGAGCAGCGCGCGCGATCAGCCGAGGCGATGGGGCAGGTCGAGGCCCGCATGCGGGCATACCAGGCCGCGCCGCCGCCCCTGCGCGTCAAAGCGGCACCTGTCGGACAGGATCCGCTCGCGGTCGCACACCGATATCGCCTGCAAGATGAAGCCGCGCGCGCTTCGCGCGACCAGTCCGACCTGCTGGCCTTCGTCTCTTTCTCGATGCCGGCCGAGAGCCTTCAGCGACTGGCTCGGGAAGCTGCGCTCACGGGTGCGGTGCTCGTCTTCCGGGGCCTCAAGGACAATTCACTCAAGGAGACGTCGGCCGCATTCCTGCCCTACTCCAAACTCGGCGCGCGCGCCCAGATCGATCCCACAGCTTTCCGTCGATACGGGATCAGGACCGTGCCGCGATATGTTCTGGTCGCTGACCCAGTGGGCGGAGGCTGTCACTCAGACGATTCGGGATGCAAAACACAGGCCTTGAGTCTGGGCGGCGATGTCAGCTTGGAGTATGCGCTGGAAAAAATGTCGGCGAGCCGCCATCTGCTCGCCCCGCGTGCAGAATCCTACCTCAAGCGGCTGGGAGGAAGATCGTGA
PROTEIN sequence
Length: 262
VRRFLPRHLSAPDLRRIWRGVCWAYRQFAIFLFVVFLCFTAVAWWRGAHATGPGPAVPSDAAIEKAMAEQRARSAEAMGQVEARMRAYQAAPPPLRVKAAPVGQDPLAVAHRYRLQDEAARASRDQSDLLAFVSFSMPAESLQRLAREAALTGAVLVFRGLKDNSLKETSAAFLPYSKLGARAQIDPTAFRRYGIRTVPRYVLVADPVGGGCHSDDSGCKTQALSLGGDVSLEYALEKMSASRHLLAPRAESYLKRLGGRS*