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SCNpilot_BF_INOC_scaffold_736

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_736_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2061)
DNA (2061bp) protein (687aa)
conjugative coupling factor TraD, TOL family id=12497086 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
conjugative coupling factor TraD, TOL family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conjugative coupling factor TraD, TOL family
SCNpilot_BF_INOC_scaffold_736_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2061..3914)
DNA (1854bp) protein (618aa)
hypothetical protein id=12497085 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes
SCNpilot_BF_INOC_scaffold_736_3
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4124..4558)
DNA (435bp) protein (145aa)
id=12497084 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497084 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_736_4
unknown

Not on your lists

5085..5342
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_736_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5342..5806
DNA (465bp) protein (155aa)
Transglycosylase SLT domain protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYG8_AROAE
Lytic transglycosylase {ECO:0000313|EMBL:KIF83732.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp
transglycosylase
SCNpilot_BF_INOC_scaffold_736_6
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5808..6383
DNA (576bp) protein (192aa)
Outer membrane protein A n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CFH2_9GAMM
Outer membrane protein A {ECO:0000313|EMBL:EAR26510.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudo
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_736_7
unknown

Not on your lists

6383..6772
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_736_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6841..7140
DNA (300bp) protein (100aa)
TraA protein; K12069 conjugal transfer pilus assembly protein TraA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_736_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7163..7450
DNA (288bp) protein (96aa)
Type IV conjugative transfer system protein TraL n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EBY2_9BURK
hypothetical protein
Type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:CCX85611.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; en
SCNpilot_BF_INOC_scaffold_736_10
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..8049
DNA (603bp) protein (201aa)
Type IV conjugative transfer system protein TraE n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y4D0_9BURK
Type IV conjugative transfer system protein TraE {ECO:0000313|EMBL:EFL83826.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium
IncF plasmid conjugative transfer pilus assembly protein TraE
SCNpilot_BF_INOC_scaffold_736_11
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8009..8719
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGJ8_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:KGM38734.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_736_12
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8716..9993
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367097D
TraB pilus assembly
TraB pilus assembly {ECO:0000313|EMBL:BAO29695.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivor
SCNpilot_BF_INOC_scaffold_736_13
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9993..10766
DNA (774bp) protein (258aa)
Thiol:disulfide interchange protein DsbC n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FH70_BURVI
Putative thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:EXI80398.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" so
Thiol:disulfide interchange protein DsbC
SCNpilot_BF_INOC_scaffold_736_14
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10763..11320
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YXM6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO99021.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
type IV conjugative transfer system protein TraV
SCNpilot_BF_INOC_scaffold_736_15
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11310..13901
DNA (2592bp) protein (864aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A36F8
Conjugal transfer ATP-binding protein TraC {ECO:0000313|EMBL:EXI84478.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
hypothetical protein
SCNpilot_BF_INOC_scaffold_736_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13903..14367
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C7A3E
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_736_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14364..14939
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FC893
hypothetical protein; K12062 conjugal transfer pilin signal peptidase TrbI Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_736_18
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14926..15561
DNA (636bp) protein (212aa)
Membrane lipoprotein lipid attachment site n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W649_ACISJ
membrane lipoprotein lipid attachment site
Membrane lipoprotein lipid attachment site {ECO:0000313|EMBL:ABM41724.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
SCNpilot_BF_INOC_scaffold_736_19
Edwardsiella ictaluri, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15558..16292
DNA (735bp) protein (245aa)
hypothetical protein id=12497069 bin=THIO_MID species=Edwardsiella ictaluri genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR67577.1}; TaxID=634503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella
SCNpilot_BF_INOC_scaffold_736_20
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16280..17326
DNA (1047bp) protein (349aa)
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU id=12497068 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
IncF plasmid conjugative transfer pilus assembly protein TraU
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22234.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_BF_INOC_scaffold_736_21
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17289..18074
DNA (786bp) protein (262aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=2 Tax=Burkholderia cenocepacia RepID=T0EEK9_9BURK
putative conjugative transfer protein
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:ERI28612.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bur
SCNpilot_BF_INOC_scaffold_736_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18071..19246
DNA (1176bp) protein (392aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=1311308 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
SCNpilot_BF_INOC_scaffold_736_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19243..20547
DNA (1305bp) protein (435aa)
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN id=12497065 bin=THIO_MID species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN Tax=GWE1_Thiobacillus_62_9_curated
conjugal transfer mating pair stabilization protein TraN
SCNpilot_BF_INOC_scaffold_736_24
unknown

Not on your lists

20582..21412
DNA (831bp) protein (277aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_736_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21415..21807
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7Z3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59409.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_BF_INOC_scaffold_736_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21804..22694
DNA (891bp) protein (297aa)
hypothetical protein id=12497062 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_736_27
Acinetobacter johnsonii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22719..24155
DNA (1437bp) protein (479aa)
TraH protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGX6_ACIJO
TraH protein {ECO:0000313|EMBL:EEY94832.1}; TaxID=575586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter johnsonii SH046.
TraH family protein
SCNpilot_BF_INOC_scaffold_736_28
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24169..27225
DNA (3057bp) protein (1019aa)
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG id=12497060 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Conjugal transfer mating pair stabilization protein TraG {ECO:0000313|EMBL:EXI89972.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candid
hypothetical protein
SCNpilot_BF_INOC_scaffold_736_29
unknown

Not on your lists

comp(27235..27642)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_736_30
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27669..27800)
DNA (132bp) protein (44aa)
hypothetical protein id=12497054 bin=THIO_MID species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying 30 items

View Taxonomy