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SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

SCNpilot_bf_inoc_Hydrogenophilales_62_44
In projects: SCNpilot_bf_inoc

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 369 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_BF_INOC_scaffold_42648
Species: Thiobacillus denitrificans (50%)
2 1468 bp 70.50 48.90 93.60
SCNpilot_BF_INOC_scaffold_21873
Species: Thiobacillus denitrificans (66.67%)
3 1642 bp 68.82 33.63 99.39
SCNpilot_BF_INOC_scaffold_34871
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1626 bp 68.82 43.07 99.63
SCNpilot_BF_INOC_scaffold_39250
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1048 bp 68.80 49.82 100.48
SCNpilot_BF_INOC_scaffold_20308
Species: Candidatus Accumulibacter sp. BA-93 (100%)
2 2111 bp 68.26 32.94 57.84
SCNpilot_BF_INOC_scaffold_1186
Class: Betaproteobacteria (56.25%)
16 15638 bp 68.15 55.13 98.01
SCNpilot_BF_INOC_scaffold_20059
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 1734 bp 68.11 53.99 98.96
SCNpilot_BF_INOC_scaffold_36238
Order: Hydrogenophilales (100%)
3 1141 bp 68.01 47.30 99.91
SCNpilot_BF_INOC_scaffold_34600
Species: Thiobacillus denitrificans (100%)
1 1191 bp 67.84 32.67 100.00
SCNpilot_BF_INOC_scaffold_35308
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
3 1701 bp 67.67 37.19 103.18
SCNpilot_BF_INOC_scaffold_20689
Species: R_Betaproteobacteria_67_26 (100%)
2 1700 bp 67.65 50.79 101.47
SCNpilot_BF_INOC_scaffold_40657
Species: Thiobacillus denitrificans (100%)
3 1502 bp 67.58 28.07 96.47
SCNpilot_BF_INOC_scaffold_17574
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 2569 bp 67.57 47.58 99.14
SCNpilot_BF_INOC_scaffold_35544
Species: CG_Hydro_01 (60%)
5 2493 bp 67.55 50.14 91.70
SCNpilot_BF_INOC_scaffold_37293
Species: Cupriavidus metallidurans (100%)
1 1109 bp 67.45 29.42 87.65
SCNpilot_BF_INOC_scaffold_2247
Species: Novosphingobium nitrogenifigens (75%)
8 8721 bp 67.43 45.19 90.71
SCNpilot_BF_INOC_scaffold_26687
Species: Thiobacillus denitrificans (100%)
1 1962 bp 67.33 49.38 99.85
SCNpilot_BF_INOC_scaffold_12569
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2349 bp 67.22 34.73 96.17
SCNpilot_BF_INOC_scaffold_48589
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1406 bp 67.07 49.45 99.22
SCNpilot_BF_INOC_scaffold_3495
Species: Thiobacillus denitrificans (75%)
8 5868 bp 66.97 42.09 100.31
SCNpilot_BF_INOC_scaffold_8890
Order: Hydrogenophilales (100%)
3 4017 bp 66.97 48.11 98.58
SCNpilot_BF_INOC_scaffold_40453
Species: Alicycliphilus sp. B1 (100%)
1 1934 bp 66.70 39.19 91.05
SCNpilot_BF_INOC_scaffold_28405
Order: Hydrogenophilales (100%)
5 2175 bp 66.62 51.70 85.79
SCNpilot_BF_INOC_scaffold_37499
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1102 bp 66.52 49.20 103.72
SCNpilot_BF_INOC_scaffold_44705
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 1607 bp 66.52 49.20 94.09
SCNpilot_BF_INOC_scaffold_60885
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1064 bp 66.45 48.12 90.51
SCNpilot_BF_INOC_scaffold_3757
Order: Hydrogenophilales (100%)
7 6346 bp 66.40 44.85 93.79
SCNpilot_BF_INOC_scaffold_39614
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1452 bp 66.25 51.34 86.57
SCNpilot_BF_INOC_scaffold_2233
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
10 9508 bp 66.19 44.93 89.39
SCNpilot_BF_INOC_scaffold_52613
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1206 bp 66.17 36.21 100.25
SCNpilot_BF_INOC_scaffold_7807
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (75%)
4 3224 bp 66.00 48.11 92.77
SCNpilot_BF_INOC_scaffold_7488
Species: Thiobacillus denitrificans (50%)
6 5440 bp 65.96 40.74 93.58
SCNpilot_BF_INOC_scaffold_57683
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1309 bp 65.93 49.47 99.24
SCNpilot_BF_INOC_scaffold_37365
Species: Thiobacillus denitrificans (100%)
1 1106 bp 65.91 45.62 64.29
SCNpilot_BF_INOC_scaffold_2308
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
12 9569 bp 65.86 49.73 95.03
SCNpilot_BF_INOC_scaffold_16097
Class: Betaproteobacteria (66.67%)
3 2000 bp 65.85 45.43 99.60
SCNpilot_BF_INOC_scaffold_60803
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1155 bp 65.80 45.42 99.48
SCNpilot_BF_INOC_scaffold_13405
Order: Hydrogenophilales (100%)
3 2988 bp 65.80 44.19 99.00
SCNpilot_BF_INOC_scaffold_2908
Order: Hydrogenophilales (100%)
8 9245 bp 65.74 45.77 93.98
SCNpilot_BF_INOC_scaffold_28378
Order: Hydrogenophilales (100%)
5 4288 bp 65.69 40.80 93.05
SCNpilot_BF_INOC_scaffold_20086
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1733 bp 65.67 50.26 101.79
SCNpilot_BF_INOC_scaffold_41676
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1457 bp 65.61 47.55 93.89
SCNpilot_BF_INOC_scaffold_5342
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 6391 bp 65.53 47.99 95.15
SCNpilot_BF_INOC_scaffold_2901
Order: Hydrogenophilales (100%)
10 10097 bp 65.42 48.75 92.05
SCNpilot_BF_INOC_scaffold_3002
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (53.33%)
15 13321 bp 65.41 49.07 95.74
SCNpilot_BF_INOC_scaffold_60598
Species: Sulfuricella sp. T08 (100%)
1 1027 bp 65.34 38.86 99.90
SCNpilot_BF_INOC_scaffold_15194
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 4169 bp 65.24 39.19 97.79
SCNpilot_BF_INOC_scaffold_10452
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
8 9349 bp 65.22 44.73 97.17
SCNpilot_BF_INOC_scaffold_32827
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1242 bp 65.22 48.91 100.24
SCNpilot_BF_INOC_scaffold_10623
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 7522 bp 65.18 47.48 89.66
Displaying items 1-50 of 369 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.