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SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

SCNpilot_bf_inoc_Hydrogenophilales_62_44
In projects: SCNpilot_bf_inoc

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 369 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_BF_INOC_scaffold_9988
Order: Hydrogenophilales (83.33%)
6 5453 bp 64.02 42.95 97.32
SCNpilot_BF_INOC_scaffold_9972
Order: Hydrogenophilales (100%)
7 6210 bp 61.29 40.38 96.47
SCNpilot_BF_INOC_scaffold_9958
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
9 7639 bp 61.76 40.74 80.31
SCNpilot_BF_INOC_scaffold_964
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (56%)
25 22326 bp 63.51 40.42 90.59
SCNpilot_BF_INOC_scaffold_959
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
18 19668 bp 57.45 39.13 91.31
SCNpilot_BF_INOC_scaffold_9544
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
5 4815 bp 62.72 43.16 81.06
SCNpilot_BF_INOC_scaffold_9459
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 2829 bp 62.96 43.56 97.88
SCNpilot_BF_INOC_scaffold_919
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (65.52%)
29 28724 bp 63.37 46.65 91.24
SCNpilot_BF_INOC_scaffold_902
Order: Hydrogenophilales (76.81%)
69 61570 bp 60.08 37.52 94.72
SCNpilot_BF_INOC_scaffold_9019
Order: Hydrogenophilales (100%)
3 2917 bp 62.94 37.34 95.75
SCNpilot_BF_INOC_scaffold_8890
Order: Hydrogenophilales (100%)
3 4017 bp 66.97 48.11 98.58
SCNpilot_BF_INOC_scaffold_8675
Class: Betaproteobacteria (60%)
5 5313 bp 64.78 48.99 76.85
SCNpilot_BF_INOC_scaffold_8583
Phylum: Proteobacteria (50%)
8 6248 bp 53.39 34.39 94.45
SCNpilot_BF_INOC_scaffold_8571
Class: Betaproteobacteria (85.71%)
7 5781 bp 60.70 47.63 73.33
SCNpilot_BF_INOC_scaffold_8247
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (71.43%)
7 4110 bp 56.37 38.78 78.69
SCNpilot_BF_INOC_scaffold_8189
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
10 7547 bp 62.41 40.54 91.31
SCNpilot_BF_INOC_scaffold_8080
Order: Hydrogenophilales (71.43%)
7 7188 bp 61.95 38.31 86.89
SCNpilot_BF_INOC_scaffold_7920
Order: Hydrogenophilales (66.67%)
6 4608 bp 58.70 43.85 85.68
SCNpilot_BF_INOC_scaffold_792
Order: Hydrogenophilales (86.15%)
65 70578 bp 62.52 44.21 91.21
SCNpilot_BF_INOC_scaffold_785
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60.47%)
43 38733 bp 63.86 44.63 87.28
SCNpilot_BF_INOC_scaffold_7807
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (75%)
4 3224 bp 66.00 48.11 92.77
SCNpilot_BF_INOC_scaffold_7650
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 6207 bp 61.75 46.02 90.38
SCNpilot_BF_INOC_scaffold_7646
Class: Betaproteobacteria (66.67%)
3 3267 bp 59.38 42.49 89.16
SCNpilot_BF_INOC_scaffold_7565
Order: Hydrogenophilales (100%)
9 6836 bp 63.17 41.82 94.40
SCNpilot_BF_INOC_scaffold_7488
Species: Thiobacillus denitrificans (50%)
6 5440 bp 65.96 40.74 93.58
SCNpilot_BF_INOC_scaffold_7467
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (80%)
5 4559 bp 64.71 42.72 94.36
SCNpilot_BF_INOC_scaffold_736
Class: Betaproteobacteria (73.33%)
30 27800 bp 62.58 137.82 97.19
SCNpilot_BF_INOC_scaffold_7339
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (53.33%)
15 11022 bp 59.23 48.28 88.46
SCNpilot_BF_INOC_scaffold_7274
Species: GWE1_Thiobacillus_62_9_curated (83.33%)
6 5989 bp 60.53 39.23 84.91
SCNpilot_BF_INOC_scaffold_7271
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
5 3384 bp 63.68 47.84 93.26
SCNpilot_BF_INOC_scaffold_7156
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 7613 bp 62.24 44.77 81.81
SCNpilot_BF_INOC_scaffold_713
Order: Hydrogenophilales (84.85%)
33 26222 bp 57.70 58.01 97.29
SCNpilot_BF_INOC_scaffold_7114
Class: Betaproteobacteria (60%)
5 3441 bp 59.02 33.70 84.05
SCNpilot_BF_INOC_scaffold_7091
Order: Hydrogenophilales (60%)
5 3450 bp 57.65 34.56 90.78
SCNpilot_BF_INOC_scaffold_7067
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (80%)
5 4199 bp 62.94 47.64 100.74
SCNpilot_BF_INOC_scaffold_6792
Order: Hydrogenophilales (75%)
8 7589 bp 61.66 43.23 69.65
SCNpilot_BF_INOC_scaffold_6764
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 5906 bp 63.82 42.84 95.45
SCNpilot_BF_INOC_scaffold_6754
Order: Hydrogenophilales (50%)
8 4651 bp 55.34 47.54 76.11
SCNpilot_BF_INOC_scaffold_6611
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 4904 bp 63.89 46.88 85.77
SCNpilot_BF_INOC_scaffold_6556
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
8 5343 bp 61.74 48.29 81.70
SCNpilot_BF_INOC_scaffold_6465
Order: Hydrogenophilales (71.43%)
7 7475 bp 61.78 48.15 88.25
SCNpilot_BF_INOC_scaffold_6387
Order: Hydrogenophilales (85%)
20 17309 bp 62.37 43.23 90.47
SCNpilot_BF_INOC_scaffold_62802
Species: Cupriavidus basilensis (100%)
1 1106 bp 58.50 41.98 66.18
SCNpilot_BF_INOC_scaffold_6220
Order: Hydrogenophilales (55.56%)
9 7319 bp 58.01 38.27 80.34
SCNpilot_BF_INOC_scaffold_6175
Order: Hydrogenophilales (71.43%)
7 5710 bp 62.59 40.49 95.78
SCNpilot_BF_INOC_scaffold_6138
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (63.64%)
11 4918 bp 60.98 51.45 88.51
SCNpilot_BF_INOC_scaffold_60885
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1064 bp 66.45 48.12 90.51
SCNpilot_BF_INOC_scaffold_60803
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1155 bp 65.80 45.42 99.48
SCNpilot_BF_INOC_scaffold_60598
Species: Sulfuricella sp. T08 (100%)
1 1027 bp 65.34 38.86 99.90
SCNpilot_BF_INOC_scaffold_5884
Class: Betaproteobacteria (76.92%)
13 9773 bp 62.69 50.83 90.59
Displaying items 1-50 of 369 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.