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SCNpilot_BF_INOC_scaffold_1002

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1002_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
Nitrogen fixation protein FixI {ECO:0000313|EMBL:CDX12369.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDX12369.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteria
Nitrogen fixation protein fixI n=1 Tax=Nitratireductor indicus C115 RepID=K2P1L2_9RHIZ
copper-translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_1002_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236..1000)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003709A11
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EZQ13048.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
putative transmembrane protein
SCNpilot_BF_INOC_scaffold_1002_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1188..1475)
DNA (288bp) protein (96aa)
putative acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=12497020 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
acylphosphatase
SCNpilot_BF_INOC_scaffold_1002_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1485..3530)
DNA (2046bp) protein (682aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=12497021 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
SCNpilot_BF_INOC_scaffold_1002_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3619..4221)
DNA (603bp) protein (201aa)
hypothetical protein id=12497022 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1002_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4237..4488)
DNA (252bp) protein (84aa)
hypothetical protein id=12497023 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96815.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1002_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4577..5995)
DNA (1419bp) protein (473aa)
NodT family RND efflux system outer membrane lipoprotein id=12497024 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
NodT family RND efflux system outer membrane lipoprotein Tax=CG_Rhodocyc_01
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_BF_INOC_scaffold_1002_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5988..9089)
DNA (3102bp) protein (1034aa)
hydrophobe/amphiphile efflux-1 (HAE1) family transporter id=12497025 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hydrophobe/amphiphile efflux-1 (HAE1) family transporter Tax=CG_Rhodocyc_01
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_BF_INOC_scaffold_1002_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9091..10185)
DNA (1095bp) protein (365aa)
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=12497026 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RND family efflux transporter MFP subunit; K03585 membrane fusion protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_1002_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10784)
DNA (603bp) protein (201aa)
putative TetR-type transcriptional regulator id=12497027 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative TetR-type transcriptional regulator Tax=RBG_16_Gammaproteobacteria_62_13__curated
putative TetR-type transcriptional regulator
SCNpilot_BF_INOC_scaffold_1002_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..12082)
DNA (969bp) protein (323aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] id=12497028 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
trans-hexaprenyltranstransferase (EC:2.5.1.30); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
trans-hexaprenyltranstransferase (EC:2.5.1.30)
SCNpilot_BF_INOC_scaffold_1002_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12252..12563
DNA (312bp) protein (104aa)
50S ribosomal protein L21P; K02888 large subunit ribosomal protein L21 id=12497029 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_1002_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12576..12839
DNA (264bp) protein (88aa)
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=12497030 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_1002_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12904..13950
DNA (1047bp) protein (349aa)
obgE, cgtA, obg, yhbZ; GTPase ObgE; K03979 GTP-binding protein id=12497031 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
obgE; GTPase ObgE
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogen
SCNpilot_BF_INOC_scaffold_1002_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13947..14216)
DNA (270bp) protein (90aa)
hypothetical protein id=12497032 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1002_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14213..16333)
DNA (2121bp) protein (707aa)
nitric oxide reductase activation protein id=12497033 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitric oxide reductase activation protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
nitric oxide reductase activation protein
SCNpilot_BF_INOC_scaffold_1002_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16333..17145)
DNA (813bp) protein (271aa)
nitric oxide reductase activation protein NorQ; K04748 nitric oxide reductase NorQ protein id=12497034 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitric oxide reductase activation protein NorQ; K04748 nitric oxide reductase NorQ protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
nitric oxide reductase activation protein NorQ
SCNpilot_BF_INOC_scaffold_1002_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17159..17650)
DNA (492bp) protein (164aa)
hypothetical protein id=12497035 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1002_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17655..18566)
DNA (912bp) protein (304aa)
hypothetical protein; K06940 id=12497036 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K06940 Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1002_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18736..18882)
DNA (147bp) protein (49aa)
adenylylsulfate reductase subunit alpha (EC:1.8.99.2); K00394 adenylylsulfate reductase, subunit A [EC:1.8.99.2] id=12497037 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
adenylylsulfate reductase subunit alpha (EC:1.8.99.2)
adenylylsulfate reductase subunit alpha (EC:1.8.99.2); K00394 adenylylsulfate reductase, subunit A [EC:1.8.99.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1002_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18860..19384)
DNA (525bp) protein (175aa)
adenylylsulfate reductase subunit alpha (EC:1.8.99.2)
APS reductase alpha subunit {ECO:0000313|EMBL:AAQ18139.1}; EC=1.8.99.2 {ECO:0000313|EMBL:AAQ18139.1};; TaxID=36861 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph
Adenylylsulfate reductase, alpha subunit n=2 Tax=Thiobacillus denitrificans RepID=Q3SKF6_THIDA
Displaying 21 items

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