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SCNpilot_BF_INOC_scaffold_101

Search features with annotation key words

Displaying items 361-390 of 426 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_101_361
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366100..366816
DNA (717bp) protein (239aa)
id=12496319 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12496319 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_101_362
unknown

Not on your lists

comp(367191..367289)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_101_363
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(367550..367993)
DNA (444bp) protein (148aa)
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] id=12496318 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cyanate hydratase (EC:4.2.1.104)
SCNpilot_BF_INOC_scaffold_101_364
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(368006..368944)
DNA (939bp) protein (313aa)
nitrate ABC transporter ATPases C and D; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] id=12496317 bin=THIO_MID species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrate ABC transporter ATPases C and D; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-] Tax=GWE1_Thiobacillus_62_9_curated
nitrate ABC transporter ATPases C and D
SCNpilot_BF_INOC_scaffold_101_365
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(368949..369803)
DNA (855bp) protein (285aa)
nitrate ABC transporter inner membrane subunit; K15577 nitrate/nitrite transport system permease protein id=12496316 bin=THIO_MID species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrate ABC transporter inner membrane subunit; K15577 nitrate/nitrite transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
nitrate ABC transporter inner membrane subunit
SCNpilot_BF_INOC_scaffold_101_366
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369800..371158)
DNA (1359bp) protein (453aa)
nitrate transporter component, NrtA; K15576 nitrate/nitrite transport system substrate-binding protein id=12496315 bin=THIO_MID species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrate transporter component, NrtA; K15576 nitrate/nitrite transport system substrate-binding protein Tax=GWE1_Thiobacillus_62_9_curated
nitrate transporter component, NrtA
SCNpilot_BF_INOC_scaffold_101_367
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

371474..373048
DNA (1575bp) protein (525aa)
NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein id=12496314 bin=THIO_MID species=Methyloversatilis sp. NVD genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
NifA subfamily transcriptional regulator; K02584 Nif-specific regulatory protein Tax=GWE1_Thiobacillus_62_9_curated
NifA subfamily transcriptional regulator
SCNpilot_BF_INOC_scaffold_101_368
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

373266..373808
DNA (543bp) protein (181aa)
OsmC family protein id=12496313 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
OsmC family protein Tax=GWE1_Thiobacillus_62_9_curated
OsmC family protein
SCNpilot_BF_INOC_scaffold_101_369
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

373840..375015
DNA (1176bp) protein (392aa)
acyl-CoA dehydrogenase domain-containing protein id=12496312 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria
acyl-CoA dehydrogenase Tax=GWE1_Thiobacillus_62_9_curated
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_101_370
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375012..375404
DNA (393bp) protein (131aa)
hypothetical protein id=12496311 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_371
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375401..375610
DNA (210bp) protein (70aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K05297 rubredoxin-NAD+ reductase [EC:1.18.1.1] id=12496310 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rubredoxin-type Fe(Cys)4 protein; K05297 rubredoxin-NAD+ reductase [EC:1.18.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_BF_INOC_scaffold_101_372
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375660..375938
DNA (279bp) protein (93aa)
hypothetical protein; K07334 proteic killer suppression protein id=12496309 bin=THIO_MID species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
higB; plasmid maintenance system killer protein HigB; K07334 proteic killer suppression protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
plasmid maintenance system killer protein HigB
SCNpilot_BF_INOC_scaffold_101_373
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375947..376249
DNA (303bp) protein (101aa)
plasmid maintenance system antidote protein id=12496308 bin=THIO_MID species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:BAO30994.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="S
SCNpilot_BF_INOC_scaffold_101_374
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

377067..377624
DNA (558bp) protein (186aa)
esterase; K07000 id=12496307 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
esterase; K07000 Tax=GWE1_Thiobacillus_62_9_curated
esterase
SCNpilot_BF_INOC_scaffold_101_375
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

377630..379498
DNA (1869bp) protein (623aa)
ribonuclease II; K01147 exoribonuclease II [EC:3.1.13.1] id=12496306 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribonuclease II
Ribonuclease II {ECO:0000313|EMBL:AAZ98528.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrifi
SCNpilot_BF_INOC_scaffold_101_376
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

379580..380416
DNA (837bp) protein (279aa)
TonB-like protein; K03832 periplasmic protein TonB id=12496305 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:AAZ98529.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitri
SCNpilot_BF_INOC_scaffold_101_377
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

380566..381579
DNA (1014bp) protein (338aa)
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] id=12496304 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=GWE1_Thiobacillus_62_9_curated
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11)
SCNpilot_BF_INOC_scaffold_101_378
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

381687..382520
DNA (834bp) protein (278aa)
methylated DNA-protein cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] id=12496303 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria
AraC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
methylated-DNA--protein-cysteine methyltransferase
SCNpilot_BF_INOC_scaffold_101_379
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382490..385678)
DNA (3189bp) protein (1063aa)
hydrophobe/amphiphile efflux-1 family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12496302 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hydrophobe/amphiphile efflux-1 family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hydrophobe/amphiphile efflux-1 family protein
SCNpilot_BF_INOC_scaffold_101_380
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(385694..386890)
DNA (1197bp) protein (399aa)
acrA6; cation/multidrug efflux system, mebrane-fusion component; K03585 membrane fusion protein id=12496301 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
AcrA/E family efflux transporter MFP subunit; K03585 membrane fusion protein Tax=GWE1_Thiobacillus_62_9_curated
acrA6; cation/multidrug efflux system, mebrane-fusion component
SCNpilot_BF_INOC_scaffold_101_381
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

386989..387630
DNA (642bp) protein (214aa)
acrR; TetR/AcrR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor id=12496300 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=GWE1_Thiobacillus_62_9_curated
acrR; TetR/AcrR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_101_382
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(387593..389035)
DNA (1443bp) protein (481aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] id=12496299 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
SCNpilot_BF_INOC_scaffold_101_383
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

389105..389662
DNA (558bp) protein (186aa)
hypothetical protein; K07735 putative transcriptional regulator id=12496298 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_384
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

389659..390096
DNA (438bp) protein (146aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=12496297 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Holliday junction resolvase-like protein
SCNpilot_BF_INOC_scaffold_101_385
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

390077..390571
DNA (495bp) protein (165aa)
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] id=12496296 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFOXYA1
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
SCNpilot_BF_INOC_scaffold_101_386
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

390568..391521
DNA (954bp) protein (318aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=12496295 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
SCNpilot_BF_INOC_scaffold_101_387
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391518..392795
DNA (1278bp) protein (426aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] id=12496294 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dihydroorotase (EC:3.5.2.3)
SCNpilot_BF_INOC_scaffold_101_388
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

392798..394360
DNA (1563bp) protein (521aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] id=12496293 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
apolipoprotein N-acyltransferase
SCNpilot_BF_INOC_scaffold_101_389
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(394344..395786)
DNA (1443bp) protein (481aa)
diguanylate cyclase id=12496292 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_101_390
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395963..396409)
DNA (447bp) protein (149aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=12496291 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Displaying items 361-390 of 426 in total

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