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SCNpilot_BF_INOC_scaffold_1209

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1209_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Alteromonas macleodii str. 'Ionian Sea U4' RepID=S5B7A6_ALTMA
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteri
SCNpilot_BF_INOC_scaffold_1209_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(139..2229)
DNA (2091bp) protein (697aa)
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G id=12498644 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
translation elongation factor 2 (EF-2/EF-G)
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph
SCNpilot_BF_INOC_scaffold_1209_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2257..2727)
DNA (471bp) protein (157aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=12498643 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=GWE1_Thiobacillus_62_9_curated
30S ribosomal protein S7
SCNpilot_BF_INOC_scaffold_1209_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2767..3144)
DNA (378bp) protein (126aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=12498642 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_1209_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3295..7494)
DNA (4200bp) protein (1400aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12498641 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
SCNpilot_BF_INOC_scaffold_1209_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7516..11595)
DNA (4080bp) protein (1360aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12498641 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWE1_Thiobacillus_62_9_curated
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
SCNpilot_BF_INOC_scaffold_1209_7
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11809..12195)
DNA (387bp) protein (129aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=12498640 bin=THIO_MID species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mi
rplL; 50S ribosomal protein L7/L12
SCNpilot_BF_INOC_scaffold_1209_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12265..12786)
DNA (522bp) protein (174aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=12498639 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplJ; 50S ribosomal protein L10
SCNpilot_BF_INOC_scaffold_1209_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13031..13726)
DNA (696bp) protein (232aa)
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=12498638 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 Tax=GWE1_Thiobacillus_62_9_curated
50S ribosomal protein L1
SCNpilot_BF_INOC_scaffold_1209_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13728..14159)
DNA (432bp) protein (144aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=12498637 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplK; 50S ribosomal protein L11
SCNpilot_BF_INOC_scaffold_1209_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14265..14792)
DNA (528bp) protein (176aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG id=12498636 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcription antitermination protein nusG
SCNpilot_BF_INOC_scaffold_1209_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14796..15158)
DNA (363bp) protein (121aa)
id=12498635 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
secE; preprotein translocase subunit SecE
SCNpilot_BF_INOC_scaffold_1209_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15292..15384)
DNA (93bp) protein (31aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12498441 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Displaying 13 items

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