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SCNpilot_BF_INOC_scaffold_179

Search features with annotation key words

Displaying items 31-60 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_179_31
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26363..26650)
DNA (288bp) protein (96aa)
hypothetical protein id=12496714 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_32
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26651..27679)
DNA (1029bp) protein (343aa)
glycine cleavage T-protein (aminomethyl transferase); K06980 id=12496715 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glycine cleavage T-protein (aminomethyl transferase); K06980 Tax=GWE1_Thiobacillus_62_9_curated
glycine cleavage system protein T
SCNpilot_BF_INOC_scaffold_179_33
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27725..28156
DNA (432bp) protein (144aa)
hypothetical protein id=12496716 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_34
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28092..29720)
DNA (1629bp) protein (543aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] id=12496717 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
L-aspartate oxidase (EC:1.4.3.16)
SCNpilot_BF_INOC_scaffold_179_35
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29898..30494
DNA (597bp) protein (199aa)
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12496718 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_179_36
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30497..31039
DNA (543bp) protein (181aa)
hypothetical protein id=12496719 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_37
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31039..31995
DNA (957bp) protein (319aa)
sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB id=12496720 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB Tax=GWE1_Thiobacillus_62_9_curated
sigma E regulatory protein, MucB/RseB
SCNpilot_BF_INOC_scaffold_179_38
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32006..32446
DNA (441bp) protein (147aa)
putative positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC id=12496721 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC Tax=GWE1_Thiobacillus_62_9_curated
positive regulator of sigma E activity
SCNpilot_BF_INOC_scaffold_179_39
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32463..33857
DNA (1395bp) protein (465aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] id=12496722 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=GWE1_Thiobacillus_62_9_curated
peptidase S1C, Do
SCNpilot_BF_INOC_scaffold_179_40
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33850..34095
DNA (246bp) protein (82aa)
hypothetical protein id=12496723 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98043.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_179_41
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34160..35959
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP
GTP-binding protein LepA; K03596 GTP-binding protein LepA id=12496724 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
GTP-binding protein LepA
SCNpilot_BF_INOC_scaffold_179_42
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35978..36787
DNA (810bp) protein (270aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=12496725 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=GWE1_Thiobacillus_62_9_curated
signal peptidase I (EC:3.4.21.89)
SCNpilot_BF_INOC_scaffold_179_43
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36797..37201
DNA (405bp) protein (135aa)
transmembrane protein id=12496726 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_179_44
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37194..37889
DNA (696bp) protein (232aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] id=12496727 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rnc; ribonuclease III (EC:3.1.26.3)
SCNpilot_BF_INOC_scaffold_179_45
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37886..38779
DNA (894bp) protein (298aa)
GTPase; K03595 GTP-binding protein Era id=12496728 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
GTPase; K03595 GTP-binding protein Era Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
GTPase
SCNpilot_BF_INOC_scaffold_179_46
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38813..39538
DNA (726bp) protein (242aa)
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=12496729 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=GWE1_Thiobacillus_62_9_curated
recO; DNA repair protein RecO
SCNpilot_BF_INOC_scaffold_179_47
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39535..40263
DNA (729bp) protein (243aa)
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] id=12496730 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyridoxine 5'-phosphate synthase
SCNpilot_BF_INOC_scaffold_179_48
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40392..41504
DNA (1113bp) protein (371aa)
small-conductance mechanosensitive channel protein; K16052 MscS family membrane protein YnaI id=12496731 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
small-conductance mechanosensitive channel protein
Small-conductance mechanosensitive channel protein {ECO:0000313|EMBL:AAZ97415.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
SCNpilot_BF_INOC_scaffold_179_49
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41523..42131)
DNA (609bp) protein (203aa)
putative integral membrane protein DedA-like protein id=12496732 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative integral membrane protein DedA-like protein Tax=GWE1_Thiobacillus_62_9_curated
integral membrane protein dedA-like protein
SCNpilot_BF_INOC_scaffold_179_50
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42187..43119)
DNA (933bp) protein (311aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=12496733 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=GWE1_Thiobacillus_62_9_curated
secF; preprotein translocase subunit SecF
SCNpilot_BF_INOC_scaffold_179_51
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43129..44943)
DNA (1815bp) protein (605aa)
preprotein translocase protein SecD; K03072 preprotein translocase subunit SecD id=12496734 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
preprotein translocase SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
SCNpilot_BF_INOC_scaffold_179_52
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45026..45343)
DNA (318bp) protein (106aa)
protein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=12496735 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=GWE1_Thiobacillus_62_9_curated
protein translocase subunit yajC
SCNpilot_BF_INOC_scaffold_179_53
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45412..46419)
DNA (1008bp) protein (336aa)
putative Zn-dependent protease id=12496736 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Zn-dependent protease
Putative Zn-dependent protease {ECO:0000313|EMBL:AAZ98030.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
SCNpilot_BF_INOC_scaffold_179_54
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46416..47459)
DNA (1044bp) protein (348aa)
transmembrane protein id=12496737 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:AAZ98029.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus den
SCNpilot_BF_INOC_scaffold_179_55
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47551..48654)
DNA (1104bp) protein (368aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=12496738 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=GWE1_Thiobacillus_62_9_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
SCNpilot_BF_INOC_scaffold_179_56
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48651..49670)
DNA (1020bp) protein (340aa)
queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=12496739 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWE1_Thiobacillus_62_9_curated
queuosine biosynthesis protein
SCNpilot_BF_INOC_scaffold_179_57
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50122..51786
DNA (1665bp) protein (555aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] id=12496740 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=GWE1_Thiobacillus_62_9_curated
glucose-6-phosphate isomerase (EC:5.3.1.9)
SCNpilot_BF_INOC_scaffold_179_58
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51795..52811
DNA (1017bp) protein (339aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] id=12496741 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glucokinase (EC:2.7.1.2)
SCNpilot_BF_INOC_scaffold_179_59
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52808..54127
DNA (1320bp) protein (440aa)
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=12496742 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=GWE1_Thiobacillus_62_9_curated
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
SCNpilot_BF_INOC_scaffold_179_60
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54111..55844
DNA (1734bp) protein (578aa)
glycosyl hydrolase family protein id=12496743 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glycosyl hydrolase family protein Tax=GWE1_Thiobacillus_62_9_curated
glycosyl hydrolase
Displaying items 31-60 of 150 in total

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