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SCNpilot_BF_INOC_scaffold_179

Search features with annotation key words

Displaying items 91-120 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_179_91
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87035..88828)
DNA (1794bp) protein (598aa)
high affinity sulfate transporter SulP; K03321 sulfate permease, SulP family id=12496774 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
high affinity sulfate transporter SulP; K03321 sulfate permease, SulP family Tax=GWE1_Thiobacillus_62_9_curated
high affinity sulfate transporter SulP
SCNpilot_BF_INOC_scaffold_179_92
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88979..89314
DNA (336bp) protein (112aa)
cytochrome c, class IC id=12496775 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cytochrome c, class IC
cytochrome c, class IC Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_179_93
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89328..89648
DNA (321bp) protein (107aa)
cytochrome c, class IC id=12496776 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cytochrome c, class IC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome c, class IC
SCNpilot_BF_INOC_scaffold_179_94
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89662..91536)
DNA (1875bp) protein (625aa)
response regulator receiver modulated diguanylate cyclase id=12496777 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
response regulator receiver modulated diguanylate cyclase
Putative diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:AAZ97976.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" so
SCNpilot_BF_INOC_scaffold_179_95
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91641..92090)
DNA (450bp) protein (150aa)
hypothetical protein id=12496778 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_96
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92098..92847)
DNA (750bp) protein (250aa)
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=12496779 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (EC:3.2.2.- 4.2.99.18)
SCNpilot_BF_INOC_scaffold_179_97
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92844..92996)
DNA (153bp) protein (51aa)
hypothetical protein id=12496780 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein id=12496780 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_179_98
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92993..93682)
DNA (690bp) protein (230aa)
electron transport complex RsxE subunit; K03613 electron transport complex protein RnfE id=12496781 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
electron transport complex RsxE subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
SCNpilot_BF_INOC_scaffold_179_99
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93679..94317)
DNA (639bp) protein (213aa)
RnfABCDGE type electron transport complex subunit G; K03612 electron transport complex protein RnfG id=12496782 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit G
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Th
SCNpilot_BF_INOC_scaffold_179_100
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94314..95342)
DNA (1029bp) protein (343aa)
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD id=12496783 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit D
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Th
SCNpilot_BF_INOC_scaffold_179_101
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95354..97075)
DNA (1722bp) protein (574aa)
electron transport complex protein RnfC; K03615 electron transport complex protein RnfC id=12496784 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
electron transport complex protein RnfC
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
SCNpilot_BF_INOC_scaffold_179_102
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97072..97623)
DNA (552bp) protein (184aa)
electron transport complex protein RnfB; K03616 electron transport complex protein RnfB id=12496785 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
electron transport complex protein RnfB; K03616 electron transport complex protein RnfB Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
electron transport complex protein RnfB
SCNpilot_BF_INOC_scaffold_179_103
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97623..98225)
DNA (603bp) protein (201aa)
RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA id=12496786 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RnfABCDGE type electron transport complex subunit A
SCNpilot_BF_INOC_scaffold_179_104
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100590..101756
DNA (1167bp) protein (389aa)
hypothetical protein id=12496787 bin=THIO_MID species=Acidiphilium sp. PM genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EGO93873.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_105
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102322..103650
DNA (1329bp) protein (443aa)
hypothetical protein id=12496788 bin=THIO_MID species=Acidiphilium sp. PM genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EGO93873.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_106
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104345..105265)
DNA (921bp) protein (307aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
cas1; CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 id=12496790 bin=THIO_MID species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=THIO_MID organism_group=Betaproteobacteria
cas1; CRISPR/Cas system-associated protein Cas1
SCNpilot_BF_INOC_scaffold_179_107
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105265..105564)
DNA (300bp) protein (100aa)
plasmid stabilization system id=12496791 bin=THIO_MID species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid stabilization system Tax=GWE2_Gallionellales_58_10_curated
plasmid stabilization system
SCNpilot_BF_INOC_scaffold_179_108
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105561..105842)
DNA (282bp) protein (94aa)
hypothetical protein id=12496792 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE2_Gallionellales_58_10_curated
prevent-host-death protein
SCNpilot_BF_INOC_scaffold_179_109
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105906..106529)
DNA (624bp) protein (208aa)
Cse3 family CRISPR-associated protein id=12496793 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81050.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCNpilot_BF_INOC_scaffold_179_110
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106520..107164)
DNA (645bp) protein (215aa)
Cas5 family CRISPR-associated protein id=12496794 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81051.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCNpilot_BF_INOC_scaffold_179_111
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107205..108332)
DNA (1128bp) protein (376aa)
CRISPR-associated protein Cse4 id=12496795 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cas7; CRISPR/Cas system-associated RAMP superfamily protein Cas7
CRISPR/Cas system-associated RAMP superfamily protein Cas7 {ECO:0000313|EMBL:BAO81052.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source
SCNpilot_BF_INOC_scaffold_179_112
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108335..108787)
DNA (453bp) protein (151aa)
Cse2 family CRISPR-associated protein id=12496796 bin=THIO_MID species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81053.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCNpilot_BF_INOC_scaffold_179_113
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108784..110298)
DNA (1515bp) protein (505aa)
Cse1 family CRISPR-associated protein id=12496797 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cse1; CRISPR/Cas system-associated protein Cse1
CRISPR/Cas system-associated protein Cse1 {ECO:0000313|EMBL:BAO81054.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
SCNpilot_BF_INOC_scaffold_179_114
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110672..113332)
DNA (2661bp) protein (887aa)
CRISPR-associated helicase Cas3; K07012 id=12496798 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
predicted helicase
Predicted helicase {ECO:0000313|EMBL:BAO81055.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCNpilot_BF_INOC_scaffold_179_115
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113342..114346)
DNA (1005bp) protein (335aa)
Helix-turn-helix type 11 domain-containing protein id=12496799 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacter
SCNpilot_BF_INOC_scaffold_179_116
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114431..115390)
DNA (960bp) protein (320aa)
hypothetical protein id=12496800 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97966.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_179_117
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115392..116054)
DNA (663bp) protein (221aa)
phosphoserine phosphatase (EC:3.1.3.3) id=12496801 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphoserine phosphatase (EC:3.1.3.3) Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phosphoserine phosphatase (EC:3.1.3.3)
SCNpilot_BF_INOC_scaffold_179_118
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116071..116823)
DNA (753bp) protein (251aa)
hypothetical protein; K07039 uncharacterized protein id=12496802 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K07039 uncharacterized protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_119
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116855..117538
DNA (684bp) protein (228aa)
integral membrane protein id=12496803 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
integral membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_179_120
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117584..121387
DNA (3804bp) protein (1268aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] id=12496804 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AAZ97961.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacill
Displaying items 91-120 of 150 in total

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