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SCNpilot_BF_INOC_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_361_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=U8BS46_PSEAI
integrase
Uncharacterized protein {ECO:0000313|EMBL:CEI17314.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
SCNpilot_BF_INOC_scaffold_361_2
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..934)
DNA (789bp) protein (263aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=K1CAZ4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIN92608.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
transposon
SCNpilot_BF_INOC_scaffold_361_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1123..1986)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UKI0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDH79092.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
SCNpilot_BF_INOC_scaffold_361_4
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2114..3298)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=K1CCK7_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXF44982.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. B
SCNpilot_BF_INOC_scaffold_361_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3302..3862)
DNA (561bp) protein (187aa)
Uncharacterized protein n=15 Tax=Proteobacteria RepID=F4G4T4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIN92614.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
SCNpilot_BF_INOC_scaffold_361_6
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3880..5523)
DNA (1644bp) protein (548aa)
Integrating conjugative element, PFGI_1 class, ParB family protein n=2 Tax=Pseudomonas aeruginosa RepID=U8ZIS8_PSEAI
Integrating conjugative element ParB {ECO:0000313|EMBL:ESR01190.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
integrating conjugative element ParB
SCNpilot_BF_INOC_scaffold_361_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5516..5752)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2CIZ7_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO23847.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
SCNpilot_BF_INOC_scaffold_361_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5736..6602)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2CRR5_PSEAI
chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:AEJ04454.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
SCNpilot_BF_INOC_scaffold_361_9
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6643..6861)
DNA (219bp) protein (73aa)
Prophage regulatory protein n=8 Tax=Proteobacteria RepID=S2XSX5_DELAC
alpa_2; phage transcriptional regulator AlpA
Transcriptional regulator {ECO:0000313|EMBL:KFJ91551.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
SCNpilot_BF_INOC_scaffold_361_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6980..7741)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GJN7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPD42605.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
Receptor protein-tyrosine kinase
SCNpilot_BF_INOC_scaffold_361_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8272..9183)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8Q3T5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPD42606.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_361_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10016..10924
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XBH7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42607.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_361_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11227..13344
DNA (2118bp) protein (706aa)
hypothetical protein id=12496683 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_361_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13584..15842
DNA (2259bp) protein (753aa)
hypothetical protein id=12496682 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_361_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15895..16959
DNA (1065bp) protein (355aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] id=12493798 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=GWE1_Thiobacillus_62_9_curated
A/G-specific adenine glycosylase (EC:3.2.2.-)
SCNpilot_BF_INOC_scaffold_361_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16988..17302
DNA (315bp) protein (105aa)
putative dissimilatory sulfite reductase id=12493797 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative dissimilatory sulfite reductase Tax=GWE1_Thiobacillus_62_9_curated
dissimilatory sulfite reductase
SCNpilot_BF_INOC_scaffold_361_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17353..18021
DNA (669bp) protein (223aa)
hypothetical protein id=12496679 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98085.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_361_18
Thermocrinis ruber, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(18029..18913)
DNA (885bp) protein (295aa)
hypothetical protein id=12496678 bin=THIO_MID species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE95403.1}; TaxID=932678 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis ruber DSM 12173.;"
SCNpilot_BF_INOC_scaffold_361_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18891..19637)
DNA (747bp) protein (249aa)
putative ribonuclease I id=12496677 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribonuclease I
Putative ribonuclease I {ECO:0000313|EMBL:AAZ98086.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_361_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19740..20663
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=12496676 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWE1_Thiobacillus_62_9_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
SCNpilot_BF_INOC_scaffold_361_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20681..20884
DNA (204bp) protein (68aa)
hypothetical protein id=12496675 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_361_22
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20923..21441
DNA (519bp) protein (173aa)
protein of unknown function DUF302 id=12496674 bin=THIO_MID species=Thioalkalivibrio sp. ALSr1 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KHF25014.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
protein of unknown function DUF302
SCNpilot_BF_INOC_scaffold_361_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21446..21868
DNA (423bp) protein (141aa)
hypothetical protein id=12496673 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_361_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21894..22865
DNA (972bp) protein (324aa)
esterase/lipase/thioesterase family protein; K07019 id=12496672 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
esterase/lipase/thioesterase family protein; K07019 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
esterase
SCNpilot_BF_INOC_scaffold_361_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22897..24270
DNA (1374bp) protein (458aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=12496671 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:AAZ98091.1}; EC=5.4.2.8 {ECO:0000313|EMBL:AAZ98091.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae;
SCNpilot_BF_INOC_scaffold_361_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24279..25385
DNA (1107bp) protein (369aa)
putative lipopolysaccharide core biosynthesis glycosyl transferase protein id=12496670 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
lipopolysaccharide core biosynthesis glycosyl transferase
Putative lipopolysaccharide core biosynthesis glycosyl transferase protein {ECO:0000313|EMBL:AAZ98092.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydroge
SCNpilot_BF_INOC_scaffold_361_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25352..27736)
DNA (2385bp) protein (795aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=12496669 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_BF_INOC_scaffold_361_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27729..28565)
DNA (837bp) protein (279aa)
phosphate/phosphonate ABC transporter periplasmic protein id=12496668 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphate/phosphonate ABC transporter periplasmic protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_361_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28853..29662
DNA (810bp) protein (270aa)
magnesium/cobalt transporter CorA; K03284 magnesium transporter id=12496667 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
magnesium/cobalt transporter CorA; K03284 magnesium transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
magnesium/cobalt transporter CorA
SCNpilot_BF_INOC_scaffold_361_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29753..30931)
DNA (1179bp) protein (393aa)
hypothetical protein id=12496666 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
Displaying items 1-30 of 107 in total

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