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SCNpilot_BF_INOC_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 382 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_55_1
Burkholderia sp. M701, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299..676
DNA (378bp) protein (126aa)
arsenic operon regulator-like protein id=12497042 bin=THIO_MID species=Leptospirillum ferriphilum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=THIO_MID organism_group=Betaproteobacteria
arsenic operon regulator-like protein
Arsenic resistance transcriptional regulator {ECO:0000313|EMBL:BAO19114.1}; TaxID=326454 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
SCNpilot_BF_INOC_scaffold_55_2
Burkholderia sp. M701, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1195..1563
DNA (369bp) protein (123aa)
arsenic resistance operon trans-acting repressor ArsD id=12497043 bin=THIO_MID species=Burkholderia sp. M701 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Rsenical resistance operon trans-acting repressor {ECO:0000313|EMBL:BAO19112.1}; TaxID=326454 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;"
arsenic resistance operon trans-acting repressor ArsD
SCNpilot_BF_INOC_scaffold_55_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1581..3347
DNA (1767bp) protein (589aa)
arsenite-activated ATPase (arsA) (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16] id=12497044 bin=THIO_MID species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
arsenite-activated ATPase (arsA) (EC:3.6.3.16)
Arsenite-activated ATPase (ArsA) {ECO:0000313|EMBL:EHL22914.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_BF_INOC_scaffold_55_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3344..3895
DNA (552bp) protein (184aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=12497045 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Glyoxalase {ECO:0000313|EMBL:KGH27052.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas tes
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_BF_INOC_scaffold_55_5
Burkholderia sp. M701, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3864..4316
DNA (453bp) protein (151aa)
signal transduction protein with cbs domains id=12497046 bin=THIO_MID species=Burkholderia sp. M701 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
CBS domain protein {ECO:0000313|EMBL:BAO19110.1}; TaxID=326454 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. M701.;
signal transduction protein with cbs domains
SCNpilot_BF_INOC_scaffold_55_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4318..5604
DNA (1287bp) protein (429aa)
arsenical pump membrane protein; K03893 arsenical pump membrane protein id=12497047 bin=THIO_MID species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testos
arsenical pump membrane protein
SCNpilot_BF_INOC_scaffold_55_7
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6052..6276)
DNA (225bp) protein (75aa)
Uncharacterized protein id=12497048 bin=THIO_MID species=Xenorhabdus nematophila genus=Xenorhabdus taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CBJ89573.1}; TaxID=406817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus ne
SCNpilot_BF_INOC_scaffold_55_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6530..6955
DNA (426bp) protein (142aa)
hypothetical protein; K07089 id=12497049 bin=THIO_MID species=Escherichia coli genus=Escherichia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Putative permease family protein {ECO:0000313|EMBL:EZJ82635.1}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
hypothetical protein
SCNpilot_BF_INOC_scaffold_55_9
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..9950
DNA (2916bp) protein (972aa)
transposase tn3 family protein id=12497050 bin=THIO_MID species=Pseudomonas syringae genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Transposase {ECO:0000313|EMBL:ETK20488.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
transposase tn3 family protein
SCNpilot_BF_INOC_scaffold_55_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10270..11190
DNA (921bp) protein (307aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC id=12497051 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=GWE1_Thiobacillus_62_9_curated
tyrosine recombinase XerC
SCNpilot_BF_INOC_scaffold_55_11
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11253..11585
DNA (333bp) protein (111aa)
membrane protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037678CB
hypothetical protein; K09771 hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_55_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11694..12140
DNA (447bp) protein (149aa)
XRE family transcriptional regulator id=12497052 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
XRE family transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_55_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12271..12672
DNA (402bp) protein (134aa)
hypothetical protein id=12497053 bin=THIO_MID species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_55_14
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12672..13379
DNA (708bp) protein (236aa)
hypothetical protein id=12497054 bin=THIO_MID species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_BF_INOC_scaffold_55_15
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13422..13745
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV93956.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
SCNpilot_BF_INOC_scaffold_55_16
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13759..14022
DNA (264bp) protein (88aa)
transcriptional regulator/antitoxin, MazE; K07172 antitoxin id=12497055 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Antitoxin {ECO:0000313|EMBL:EYC52151.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara
transcriptional regulator/antitoxin, MazE
SCNpilot_BF_INOC_scaffold_55_17
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14185..14433
DNA (249bp) protein (83aa)
putative plasmid stability protein id=12497056 bin=THIO_MID species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid stabilization protein
Plasmid stabilization protein {ECO:0000313|EMBL:AIQ99561.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Plurali
SCNpilot_BF_INOC_scaffold_55_18
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14430..14849
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
putative nucleic acid-binding protein, contains PIN domain id=12497057 bin=THIO_MID species=Enterobacter mori genus=Enterobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PilT domain-containing protein
SCNpilot_BF_INOC_scaffold_55_19
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14870..15055
DNA (186bp) protein (62aa)
Uncharacterized protein id=12497058 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPZ14395.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
SCNpilot_BF_INOC_scaffold_55_20
unknown

Not on your lists

15475..15756
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_55_21
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15826..16092
DNA (267bp) protein (89aa)
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497059 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_55_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16093..18954)
DNA (2862bp) protein (954aa)
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG id=12497060 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TraG domain-containing protein; K12056 conjugal transfer mating pair stabilization protein TraG Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_55_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18955..20418)
DNA (1464bp) protein (488aa)
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH id=12497061 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
conjugative transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH Tax=GWE1_Thiobacillus_62_9_curated
conjugative transfer pilus assembly protein TraH
SCNpilot_BF_INOC_scaffold_55_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20433..21242)
DNA (810bp) protein (270aa)
hypothetical protein id=12497062 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_55_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21239..21655)
DNA (417bp) protein (139aa)
hypothetical protein id=12497063 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_55_26
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21652..22488)
DNA (837bp) protein (279aa)
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497064 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_55_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22485..23786)
DNA (1302bp) protein (434aa)
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN id=12497065 bin=THIO_MID species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conjugal transfer mating pair stabilization protein TraN
SCNpilot_BF_INOC_scaffold_55_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23783..24898)
DNA (1116bp) protein (372aa)
id=12497066 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_55_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24895..25584)
DNA (690bp) protein (230aa)
IncF plasmid conjugative transfer protein TrbC
hypothetical protein id=12497067 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_55_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25586..26599)
DNA (1014bp) protein (338aa)
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU id=12497068 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
traU; hypothetical protein; K12060 conjugal transfer pilus assembly protein TraU Tax=GWE1_Thiobacillus_62_9_curated
IncF plasmid conjugative transfer pilus assembly protein TraU
Displaying items 1-30 of 382 in total

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