ggKbase home page

SCNpilot_BF_INOC_scaffold_55_41

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(35201..35791)

Top 3 Functional Annotations

Value Algorithm Source
type IV conjugative transfer system protein TraE; K12067 conjugal transfer pilus assembly protein TraE id=12497079 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 393
  • Evalue 1.70e-106
traE; plasmid-like conjugative transfer protein TraE; K12067 conjugal transfer pilus assembly protein TraE Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 196.0
  • Bit_score: 320
  • Evalue 1.50e-84
type IV conjugative transfer system protein TraE similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 118
  • Evalue 2.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGCGCATCGACAAACTCAGTGGCCACGTCGCTGCTGCGACAGGCGTAAAGCAGTGGATGGTCGCGATGTTCGCACTGTCACAGCTGGCACTGGTCCTCACTCTCATCATATTCCTCGCACGTGGCGACACGCACCGCGAAACGCTCGTACCGCCGACGATACACAGCACCTTCTGGGTACAGGACGACAAAGTATCCAAGGAGTACCTCATTGAGATGGGGGTGTTCCTCGCACAGCTTTACTTCGACGTCACCCCGCAGAACGTCGAATTCAATCACCGCACGCTCAAGAATTACGTCGATCCGCGTTTCTACGGTGTCCTTGAAACGCAGGCCGGCGCCTATGCGCAGAAGGTGAAGTCAGACAACGCGAGCACGTTTCTCGCCATTGCCACAGTCATTCCAGACGAGGCCAATCAACGGATAGGCATACAGGGTGTGCTGAACACCTATCTGGGAGATACGCGTACCTCCCAGGCCAACAAGACCTACGTTTTCGAATTCGGCCGCCACGGCGGCCGTGTGCTCCTGATCGGGATGAAGGAAGGCAAGAATGCAACCAAACCGTTTGAAGAAATCACGACGCCTTGA
PROTEIN sequence
Length: 197
MRIDKLSGHVAAATGVKQWMVAMFALSQLALVLTLIIFLARGDTHRETLVPPTIHSTFWVQDDKVSKEYLIEMGVFLAQLYFDVTPQNVEFNHRTLKNYVDPRFYGVLETQAGAYAQKVKSDNASTFLAIATVIPDEANQRIGIQGVLNTYLGDTRTSQANKTYVFEFGRHGGRVLLIGMKEGKNATKPFEEITTP*