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SCNpilot_BF_INOC_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_193_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1104..1679
DNA (576bp) protein (192aa)
P pilus assembly protein, pilin FimA n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5I1_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KGI78996.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
fimbrial protein
SCNpilot_BF_INOC_scaffold_193_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1766..2512
DNA (747bp) protein (249aa)
P pilus assembly protein, chaperone PapD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL01_9GAMM
molecular chaperone EcpD
Molecular chaperone EcpD {ECO:0000313|EMBL:AHX15581.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
SCNpilot_BF_INOC_scaffold_193_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2509..5262
DNA (2754bp) protein (918aa)
P pilus assembly protein, porin PapC (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK97_9GAMM
P pilus assembly protein, porin PapC {ECO:0000313|EMBL:EIL87638.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
hypothetical protein
SCNpilot_BF_INOC_scaffold_193_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5559..6305
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B8F4A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16468.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_193_5
unknown

Not on your lists

comp(6309..6773)
DNA (465bp) protein (155aa)
hypothetical protein
SCNpilot_BF_INOC_scaffold_193_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6875..8002)
DNA (1128bp) protein (376aa)
Peptidase t2 asparaginase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2R9_9GAMM
Peptidase t2 asparaginase 2 {ECO:0000313|EMBL:EIL93760.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
peptidase S51 dipeptidase E
SCNpilot_BF_INOC_scaffold_193_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8129..8701
DNA (573bp) protein (191aa)
transcriptional regulator n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036150AF
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJC46670.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacch
SCNpilot_BF_INOC_scaffold_193_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8698..9780
DNA (1083bp) protein (361aa)
Two-component system sensor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S1_9GAMM
Two-component system sensor protein {ECO:0000313|EMBL:EIL93762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
histidine kinase
SCNpilot_BF_INOC_scaffold_193_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9863..12916
DNA (3054bp) protein (1018aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D6735
TonB-dependent receptor Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_193_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13065..14156)
DNA (1092bp) protein (364aa)
GTP-binding protein YchF n=1 Tax=Dyella japonica RepID=UPI0002F60E30
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiag
ychF; GTP-binding protein
SCNpilot_BF_INOC_scaffold_193_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14266..14865)
DNA (600bp) protein (200aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Peptidyl-tRNA hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S4_9GAMM
peptidyl-tRNA hydrolase
SCNpilot_BF_INOC_scaffold_193_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15060..15782)
DNA (723bp) protein (241aa)
50S ribosomal protein L25 n=1 Tax=Dyella ginsengisoli RepID=UPI000345573A
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1163407 s
SCNpilot_BF_INOC_scaffold_193_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15923..16882)
DNA (960bp) protein (320aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036131C0
SCNpilot_BF_INOC_scaffold_193_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17605..18225)
DNA (621bp) protein (207aa)
Outer-membrane lipoprotein LolB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ25_9GAMM
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
outer membrane lipoprotein LolB
SCNpilot_BF_INOC_scaffold_193_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18222..20090)
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W541_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94582.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_193_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20165..21427
DNA (1263bp) protein (421aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN5_9GAMM
SCNpilot_BF_INOC_scaffold_193_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21424..22506
DNA (1083bp) protein (361aa)
peptide chain release factor 1 n=1 Tax=Dyella japonica RepID=UPI000308AFB2
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
SCNpilot_BF_INOC_scaffold_193_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22503..24764
DNA (2262bp) protein (754aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030BDFB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14300.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
SCNpilot_BF_INOC_scaffold_193_19
unknown

Not on your lists

25168..25557
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_193_20
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25651..26172
DNA (522bp) protein (174aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVJ4_PSEUU
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" sourc
molybdenum cofactor biosynthesis protein B
SCNpilot_BF_INOC_scaffold_193_21
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26386..26652)
DNA (267bp) protein (89aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553, ECO:0000256|SAAS:SAAS00255930}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
Acylphosphatase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7G2D0_XANCT
acylphosphatase
SCNpilot_BF_INOC_scaffold_193_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26655..27161)
DNA (507bp) protein (169aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T4_9GAMM
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EIL93775.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
thiol-disulfide isomerase-like thioredoxin
SCNpilot_BF_INOC_scaffold_193_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27158..28423)
DNA (1266bp) protein (422aa)
hypothetical protein (EC:3.1.-.-)
UPF0761 membrane protein rbn n=1 Tax=Rhodanobacter denitrificans RepID=I4WG37_9GAMM
UPF0761 membrane protein LF63_0111300 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" sourc
SCNpilot_BF_INOC_scaffold_193_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28609..29205
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H dehydrogenase (quinone) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T6_9GAMM
NAD(P)H:quinone oxidoreductase, type IV
SCNpilot_BF_INOC_scaffold_193_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29202..29549
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
membrane protein
SCNpilot_BF_INOC_scaffold_193_26
unknown

Not on your lists

comp(29920..30453)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_193_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30705..31178
DNA (474bp) protein (158aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDU3_RHOM4
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACY49087.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
SCNpilot_BF_INOC_scaffold_193_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31282..32412)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGA7_9GAMM
SCNpilot_BF_INOC_scaffold_193_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32475..32879)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C6EF8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89832.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_BF_INOC_scaffold_193_30
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32923..33999)
DNA (1077bp) protein (359aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EEB5E
S-adenosylmethionine tRNA ribosyltransferase
Displaying items 1-30 of 287 in total

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