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SCNpilot_BF_INOC_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_260_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_260_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95..1015)
DNA (921bp) protein (307aa)
coproporphyrinogen III oxidase n=1 Tax=Dyella ginsengisoli RepID=UPI000366E9A7
coproporphyrinogen III oxidase
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
SCNpilot_BF_INOC_scaffold_260_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1118..2314
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000303BBD3
3-oxoacyl-ACP synthase
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHX15101.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
SCNpilot_BF_INOC_scaffold_260_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2311..3111
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B3331
Uncharacterized protein {ECO:0000313|EMBL:KGI76726.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
beta-ketoacyl synthase family protein
SCNpilot_BF_INOC_scaffold_260_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3108..3947
DNA (840bp) protein (280aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP8_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL98289.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
glycosyl transferase
SCNpilot_BF_INOC_scaffold_260_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3952..5550
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347F411
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein {ECO:0000313|EMBL:EIL88020.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
halogenase
SCNpilot_BF_INOC_scaffold_260_7
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5571..6515)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CR14_STEMA
Peptidoglycan-binding protein {ECO:0000313|EMBL:KGM56408.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter ar
hypothetical protein
SCNpilot_BF_INOC_scaffold_260_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6757..7488)
DNA (732bp) protein (244aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2M5_9GAMM
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:GAN45055.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibac
SCNpilot_BF_INOC_scaffold_260_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..7935)
DNA (435bp) protein (145aa)
Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP6_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:GAN45054.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
putative 3-hydroxylacyl-(acyl carrier protein) dehydratase
SCNpilot_BF_INOC_scaffold_260_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..10395)
DNA (2415bp) protein (805aa)
Putative exporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW3_9GAMM
Xanthomonadin exporter protein {ECO:0000313|EMBL:KGI76730.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagri
putative exporter
SCNpilot_BF_INOC_scaffold_260_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..11039)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW4_9GAMM
fatty acyl CoA synthetase
Fatty acyl CoA synthetase {ECO:0000313|EMBL:AHX15107.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensi
SCNpilot_BF_INOC_scaffold_260_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11023..11982)
DNA (960bp) protein (320aa)
Acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW5_9GAMM
Acyltransferase {ECO:0000313|EMBL:GAN45972.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedim
acyltransferase
SCNpilot_BF_INOC_scaffold_260_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11979..12275)
DNA (297bp) protein (99aa)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLD5_9GAMM
(3R)-hydroxymyristoyl-ACP dehydratase {ECO:0000313|EMBL:EIL88026.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase
SCNpilot_BF_INOC_scaffold_260_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12272..12997)
DNA (726bp) protein (242aa)
Ketosynthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP1_9GAMM
Ketosynthase {ECO:0000313|EMBL:EIL98282.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
xanthomonadin biosynthesis membrane protein
SCNpilot_BF_INOC_scaffold_260_15
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..14405
DNA (1323bp) protein (441aa)
Hydroxylase {ECO:0000313|EMBL:CCP39866.1}; EC=1.14.13.- {ECO:0000313|EMBL:CCP39866.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthom
Hydroxylase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYH7_XANCT
hydroxylase
SCNpilot_BF_INOC_scaffold_260_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14413..15267
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX66_9GAMM
Hydrolase of the alpha-beta fold superfamily protein {ECO:0000313|EMBL:EIL87902.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_BF_INOC_scaffold_260_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..16118
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMI2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45712.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_260_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16254..17252)
DNA (999bp) protein (333aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR7_9GAMM
delta-aminolevulinic acid dehydratase
SCNpilot_BF_INOC_scaffold_260_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17510..17989
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNC5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45554.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
membrane protease subunit, stomatin/prohibitin
SCNpilot_BF_INOC_scaffold_260_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18267..18866
DNA (600bp) protein (200aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
16S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002EC63D1
16S rRNA methyltransferase
SCNpilot_BF_INOC_scaffold_260_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18940..19776
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003790276
Chromosome partitioning protein {ECO:0000313|EMBL:KGI76699.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
chromosome partitioning protein
SCNpilot_BF_INOC_scaffold_260_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19773..20639
DNA (867bp) protein (289aa)
ParB-like partition protein n=2 Tax=mine drainage metagenome RepID=T1C1C4_9ZZZZ
Chromosome partitioning protein ParB {ECO:0000313|EMBL:GAN45557.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
ParB-like partition protein
SCNpilot_BF_INOC_scaffold_260_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20800..21516
DNA (717bp) protein (239aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA288
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:GAN45559.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source
dolichol-phosphate mannosyltransferase
SCNpilot_BF_INOC_scaffold_260_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21713..22615
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XEV5_DELAC
NHL repeat containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
cell surface protein
SCNpilot_BF_INOC_scaffold_260_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22736..23092
DNA (357bp) protein (119aa)
YCII-related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNM2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAN45449.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
YCII-related protein
SCNpilot_BF_INOC_scaffold_260_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23163..23507
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D42B62
Uncharacterized protein {ECO:0000313|EMBL:KJL36628.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_BF_INOC_scaffold_260_27
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23504..23866
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037B2937
YCII-related protein {ECO:0000313|EMBL:EGI78588.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATC
hypothetical protein
SCNpilot_BF_INOC_scaffold_260_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23863..25086
DNA (1224bp) protein (408aa)
RNA polymerase sigma70 factor {ECO:0000313|EMBL:GAN45450.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
Putative RNA polymerase, sigma-24 subunit, ECF subfamily id=4216382 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA polymerase sigma factor containing a TPR repeat domain
SCNpilot_BF_INOC_scaffold_260_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25230..25673)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377DE5B
Membrane protein {ECO:0000313|EMBL:GAN45560.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
membrane protein
SCNpilot_BF_INOC_scaffold_260_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25732..26142)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87171.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
Displaying items 1-30 of 72 in total

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