ggKbase home page

SCNpilot_BF_INOC_scaffold_11

Search features with annotation key words

Displaying items 91-120 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_11_91
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(108350..110743)
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000364619B
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_92
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110891..114097)
DNA (3207bp) protein (1069aa)
Putative ATP synthase F0, A subunit n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHM7_9CLOT
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EEG29045.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] me
swrC; Swarming motility protein SwrC
SCNpilot_BF_INOC_scaffold_11_93
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114142..114735)
DNA (594bp) protein (198aa)
Regulatory protein TetR n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZN2_MAHA5
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KJR47682.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporos
TetR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_11_94
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114898..115296
DNA (399bp) protein (133aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PS62_CLOSD
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eub
SCNpilot_BF_INOC_scaffold_11_95
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

115497..117851
DNA (2355bp) protein (785aa)
alpha-galactosidase (EC:3.2.1.22)
Putative uncharacterized protein id=4071636 bin=GWF2_Firmicute_57_13 species=Anoxybacillus flavithermus genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
SCNpilot_BF_INOC_scaffold_11_96
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

117912..118682
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5MYU9_CLOK5
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_97
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118685..119461
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JUB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34792.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_98
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

119430..120272
DNA (843bp) protein (281aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5H4_9BACT
SCNpilot_BF_INOC_scaffold_11_99
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

120293..121351
DNA (1059bp) protein (353aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KKN7_9FLAO
magnesium transporter
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Celluloph
SCNpilot_BF_INOC_scaffold_11_100
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121365..122120
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUG5_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49833.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_11_101
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

122131..123501
DNA (1371bp) protein (457aa)
Na+/H+ antiporter NhaC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUF6_ALKMQ
Na+/H+ antiporter NhaC
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:ABR49824.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strai
SCNpilot_BF_INOC_scaffold_11_102
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

123560..124006
DNA (447bp) protein (149aa)
Transcriptional regulator MarR family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BFL4_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA63028.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
transcriptional regulator, MarR family
SCNpilot_BF_INOC_scaffold_11_103
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124119..125009
DNA (891bp) protein (297aa)
fatty acid-binding protein DegV n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D69197
fatty acid-binding protein DegV
Fatty acid-binding protein DegV {ECO:0000313|EMBL:AHF10672.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DS
SCNpilot_BF_INOC_scaffold_11_104
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125091..126680)
DNA (1590bp) protein (530aa)
Multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1) n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1E2_MAHA5
multisubunit sodium/proton antiporter subunit MrpD
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_11_105
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126677..127051)
DNA (375bp) protein (125aa)
Multisubunit sodium/proton antiporter, MrpC subunit (TC 2.A.63.1) n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1E3_MAHA5
multisubunit sodium/proton antiporter subunit MrpC
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_11_106
Dolosigranulum pigrum, Dolosigranulum, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(127052..127441)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NE62_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR33789.1}; TaxID=883103 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.;" source="Dolosigranulum pigrum ATCC 515
multisubunit sodium/proton antiporter subunit MrpB
SCNpilot_BF_INOC_scaffold_11_107
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127434..127709)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1E5_MAHA5
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_11_108
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127706..128248)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1E6_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE97065.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sed
SCNpilot_BF_INOC_scaffold_11_109
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128251..128535)
DNA (285bp) protein (95aa)
Multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1) n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1E7_MAHA5
multisubunit sodium/proton antiporter subunit MrpG
Multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1) {ECO:0000313|EMBL:AEE97066.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Ther
SCNpilot_BF_INOC_scaffold_11_110
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128535..128786)
DNA (252bp) protein (84aa)
Multiple resistance and pH regulation protein F n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMD6_ALKMQ
pH regulation protein F {ECO:0000313|EMBL:KJF27403.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
multiple resistance and pH regulation protein F
SCNpilot_BF_INOC_scaffold_11_111
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128783..129271)
DNA (489bp) protein (163aa)
Cation antiporter n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMD5_ALKMQ
cation antiporter
Cation antiporter {ECO:0000313|EMBL:ABR47353.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYM
SCNpilot_BF_INOC_scaffold_11_112
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129464..130495)
DNA (1032bp) protein (344aa)
Peptidase M42 family protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SS91_CLOC7
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ADL52538.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (str
SCNpilot_BF_INOC_scaffold_11_113
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130528..131112)
DNA (585bp) protein (195aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Clostridium ultunense Esp RepID=M1Z5C7_9CLOT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:CCQ93216.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
SCNpilot_BF_INOC_scaffold_11_114
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(131124..131825)
DNA (702bp) protein (234aa)
Cytochrome c biogenesis protein, transmembrane region, dsbD family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B123_CLOA9
cytochrome c biogenesis protein, transmembrane region, dsbD family
Cytochrome c biogenesis protein, transmembrane region, dsbD family {ECO:0000313|EMBL:AFS79718.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostr
SCNpilot_BF_INOC_scaffold_11_115
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133083..134252
DNA (1170bp) protein (390aa)
Putative signal transduction protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGC0_9CLOT
Putative signal transduction protein {ECO:0000313|EMBL:EMS70405.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium]
signal transduction protein
SCNpilot_BF_INOC_scaffold_11_116
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134330..135073
DNA (744bp) protein (248aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranae
prsA2; foldase protein PrsA (EC:5.2.1.8)
Foldase protein PrsA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CH19_9CLOT
SCNpilot_BF_INOC_scaffold_11_117
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135168..136550
DNA (1383bp) protein (461aa)
Peptidase family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWV0_CLOA9
peptidase family protein
Peptidase family protein {ECO:0000313|EMBL:AFS77714.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 60
SCNpilot_BF_INOC_scaffold_11_118
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

136667..137623
DNA (957bp) protein (319aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=5 Tax=Pelosinus fermentans RepID=I8RK29_9FIRM
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EIW18650.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosi
metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_11_119
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137714..138232)
DNA (519bp) protein (173aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=S2YBQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86111.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_120
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

138373..139881
DNA (1509bp) protein (503aa)
ypwA; metalloprotease YpwA (EC:3.4.24.-)
YpwA protein n=5 Tax=Bacillus RepID=E5W134_9BACI
Peptidase M32 {ECO:0000313|EMBL:EQM27184.1}; TaxID=1368424 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis CG-B52.;"
Displaying items 91-120 of 320 in total

View Taxonomy