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SCNpilot_BF_INOC_scaffold_11

Search features with annotation key words

Displaying items 31-60 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_11_31
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33511..34527
DNA (1017bp) protein (339aa)
Lysylphosphatidylglycerol synthetase/UPF0104 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JN14_CELLD
lysylphosphatidylglycerol synthetase/UPF0104
Lysylphosphatidylglycerol synthetase/UPF0104 {ECO:0000313|EMBL:ADZ82356.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.
SCNpilot_BF_INOC_scaffold_11_32
unknown

Not on your lists

34544..35602
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_33
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35702..36592)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000380B0A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24132.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_11_34
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36632..38368)
DNA (1737bp) protein (579aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUC7_9CLOT
Thiamine ABC transporter permease {ECO:0000313|EMBL:KGG79419.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter
multidrug ABC transporter ATPase/permease
SCNpilot_BF_INOC_scaffold_11_35
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38650..39243
DNA (594bp) protein (198aa)
TetR family transcriptional regulator n=1 Tax=Paenibacillus vortex V453 RepID=E5YY46_9BACL
DNA-binding transcriptional repressor AcrR {ECO:0000313|EMBL:CDO04894.1}; TaxID=171693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus pictura
transcriptional regulator, TetR family
SCNpilot_BF_INOC_scaffold_11_36
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39246..40193
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Clostridiaceae RepID=R0BBT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61825.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter related protein
SCNpilot_BF_INOC_scaffold_11_37
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

40204..41520
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B5AC3A
ABC transporter Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SCNpilot_BF_INOC_scaffold_11_38
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41619..43319)
DNA (1701bp) protein (567aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source=
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Fusobacterium necrophorum RepID=E5BLA6_9FUSO
histidine kinase
SCNpilot_BF_INOC_scaffold_11_39
Fusobacterium hwasookii, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(43316..44125)
DNA (810bp) protein (270aa)
Two-component response regulator yesN n=1 Tax=Fusobacterium nucleatum ChDC F128 RepID=J8VL11_FUSNU
Two-component response regulator yesN {ECO:0000313|EMBL:EJU08141.1}; TaxID=1216362 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium hwasookii
two-component response regulator YesN
SCNpilot_BF_INOC_scaffold_11_40
Facklamia languida, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(44125..45237)
DNA (1113bp) protein (371aa)
Methionine-R-sulfoxide reductase n=1 Tax=Facklamia languida CCUG 37842 RepID=H3NJQ6_9LACT
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EHR36869.1}; TaxID=883113 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia languida CCUG 37842.
methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase
SCNpilot_BF_INOC_scaffold_11_41
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(45250..45882)
DNA (633bp) protein (211aa)
Redoxin family protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQE6_FILAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ27492.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
SCNpilot_BF_INOC_scaffold_11_42
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45893..46582)
DNA (690bp) protein (230aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQE7_FILAD
cytochrome c-type biogenesis protein CcdA
Cytochrome c-type biogenesis protein CcdA {ECO:0000313|EMBL:EFE29000.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor
SCNpilot_BF_INOC_scaffold_11_43
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

46709..47191
DNA (483bp) protein (161aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PPW3_9FUSO
N-formylmethionyl-tRNA deformylase
SCNpilot_BF_INOC_scaffold_11_44
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47291..49009
DNA (1719bp) protein (573aa)
Methyl-accepting chemotaxis protein, putative n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0N8_CLONN
Chemotaxis protein {ECO:0000313|EMBL:KEH94462.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
methyl-accepting chemotaxis protein
SCNpilot_BF_INOC_scaffold_11_45
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(49130..50191)
DNA (1062bp) protein (354aa)
Similar to sigma 54 response regulatory protein id=1734817 bin=GWB2_Clostridiales_37_7 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
response regulator receiver modulated metal dependent phosphohydrolase Tax=GWB2_Clostridiales_37_7_curated
two component system response regulator, modulated diguanylate cyclase
SCNpilot_BF_INOC_scaffold_11_46
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

50339..52015
DNA (1677bp) protein (559aa)
Putative signal transduction histidine kinase id=1734818 bin=GWB2_Clostridiales_37_7 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
histidine kinase Tax=GWB2_Clostridiales_37_7_curated
phosphate starvation-inducible protein PsiE
SCNpilot_BF_INOC_scaffold_11_47
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52070..54745)
DNA (2676bp) protein (892aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPB4_9CLOT
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EET88992.1}; Flags: Precursor;; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_BF_INOC_scaffold_11_48
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54971..55387
DNA (417bp) protein (139aa)
Putative Hemerythrin-like protein CA_C0069 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTF0_CLOSD
putative Hemerythrin-like protein CA_C0069
Putative Hemerythrin-like protein CA_C0069 {ECO:0000313|EMBL:CBH22154.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clos
SCNpilot_BF_INOC_scaffold_11_49
unknown

Not on your lists

55429..55719
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_50
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(55790..56695)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037B8FC5
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EGL20233.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp.
putative Dehydogenase
SCNpilot_BF_INOC_scaffold_11_51
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56878..57789
DNA (912bp) protein (304aa)
rocF; arginase (EC:3.5.3.1)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031E1B58
Tax=BJP_IG2103_Clostridiales_50_15
SCNpilot_BF_INOC_scaffold_11_52
unknown

Not on your lists

comp(57868..58170)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_53
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58273..59754
DNA (1482bp) protein (494aa)
DEAD/DEAH box helicase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FHD5_9CLOT
DEAD/DEAH box helicase
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_54
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59872..60357
DNA (486bp) protein (162aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=6 Tax=Clostridium thermocellum RepID=A3DFD9_CLOTH
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABN52668.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clos
SCNpilot_BF_INOC_scaffold_11_55
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60350..61234
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XT10_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_56
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

61336..62355
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLV2_TREBD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE15644.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strai
SCNpilot_BF_INOC_scaffold_11_57
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62638..64089
DNA (1452bp) protein (484aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSL9_CLOPH
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EXG87609.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_11_58
unknown

Not on your lists

64129..64236
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_59
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64217..65143
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium intestinale URNW RepID=U2N0W9_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ERK29147.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
binding-protein-dependent transport systems inner membrane component rbh
SCNpilot_BF_INOC_scaffold_11_60
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65156..66037
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSL7_CLOPH
ABC transporter {ECO:0000313|EMBL:KEZ90603.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
binding-protein-dependent transport systems inner membrane component rbh
Displaying items 31-60 of 320 in total

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