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SCNpilot_BF_INOC_scaffold_11

Search features with annotation key words

Displaying items 151-180 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_11_151
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174698..176650)
DNA (1953bp) protein (651aa)
Hsp90 protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPP2_9FIRM
heat shock protein Hsp90
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_11_152
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

176757..177419
DNA (663bp) protein (221aa)
Putative CBS:Amino acid-binding ACT n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTI4_CLOSD
putative CBS:Amino acid-binding ACT
Putative CBS:Amino acid-binding ACT {ECO:0000313|EMBL:CBH22188.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium
SCNpilot_BF_INOC_scaffold_11_153
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

177709..178854
DNA (1146bp) protein (382aa)
GGDEF domain-containing protein id=2141659 bin=GWB2_Clostridiales_37_7 species=Arcobacter sp. L genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
GGDEF domain-containing protein Tax=GWB2_Clostridiales_37_7_curated
diguanylate cyclase and metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_11_154
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(178973..179668)
DNA (696bp) protein (232aa)
Integral membrane protein DUF1461 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWR4_CLOA9
hypothetical protein
Integral membrane protein DUF1461 {ECO:0000313|EMBL:AFS78263.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906
SCNpilot_BF_INOC_scaffold_11_155
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

179796..183089
DNA (3294bp) protein (1098aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01452}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01452};; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01452};; ATP-dependent helic
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ADDB_ALKOO
ATP-dependent nuclease subunit AddB
SCNpilot_BF_INOC_scaffold_11_156
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183093..186722
DNA (3630bp) protein (1210aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
addA; ATP-dependent helicase/deoxyribonuclease, subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B070_CLOA9
SCNpilot_BF_INOC_scaffold_11_157
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

186736..187533
DNA (798bp) protein (266aa)
3-2-5-bisphosphate nucleotidase (EC:3.1.3.7)
Inositol monophosphatase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP05_9CLOT
Inositol monophosphatase {ECO:0000313|EMBL:EET89083.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
SCNpilot_BF_INOC_scaffold_11_158
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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187540..188235
DNA (696bp) protein (232aa)
HAD hydrolase family n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RK29_9FUSO
HAD hydrolase family {ECO:0000313|EMBL:ERK68924.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775
HAD superfamily hydrolase
SCNpilot_BF_INOC_scaffold_11_159
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188296..188955
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=3692493 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_160
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(189058..190839)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclos
arlS; signal transduction histidine-protein kinase ArlS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DDF9_9FIRM
SCNpilot_BF_INOC_scaffold_11_161
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(190823..191512)
DNA (690bp) protein (230aa)
Predicted transcriptional regulator n=2 Tax=Clostridium RepID=D8GUD1_CLOLD
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KDR96689.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
two component transcriptional regulator, winged helix family
SCNpilot_BF_INOC_scaffold_11_162

Not on your lists

comp(191618..192121)
DNA (504bp) protein (168aa)
Ubiquitin-associated-domain-containing protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F865_9BACT
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:EKE27371.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_163
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192212..192682)
DNA (471bp) protein (157aa)
UBA/TS-N domain n=2 Tax=Clostridium butyricum RepID=B1QWZ5_CLOBU
Ubiquitin {ECO:0000313|EMBL:KJF25673.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
UBA/TS-N domain-containing protein
SCNpilot_BF_INOC_scaffold_11_164
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

193082..194245
DNA (1164bp) protein (388aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJL6_CLOPH
major facilitator transporter
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_165
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(194235..194771)
DNA (537bp) protein (179aa)
GTP pyrophosphokinase , (P)ppGpp synthetase II/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:GAM13187.1}; EC=2.7.6.5 {ECO:0000313|EMBL:GAM13187.1};; EC=3.1.7.2 {ECO:000031
GTP pyrophosphokinase (EC:2.7.6.5 3.1.7.2)
phosphohydrolase n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002895096
SCNpilot_BF_INOC_scaffold_11_166
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

194859..195230
DNA (372bp) protein (124aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier-protein] synthase n=2 Tax=Clostridiales RepID=B0AD43_9FIRM
acpS; 4'-phosphopantetheinyl transferase
SCNpilot_BF_INOC_scaffold_11_167
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

195304..196476
DNA (1173bp) protein (391aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=572480 species="Bacteria; Proteob
Alanine racemase n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V329_ARCNC
SCNpilot_BF_INOC_scaffold_11_168
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196566..196934
DNA (369bp) protein (123aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
mRNA interferase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TV44_BACCJ
transcriptional modulator of MazE/toxin, MazF
SCNpilot_BF_INOC_scaffold_11_169
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196964..199147
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ61_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79083.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
SCNpilot_BF_INOC_scaffold_11_170
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

199140..200225
DNA (1086bp) protein (362aa)
Polysaccharide pyruvyl transferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1T8_CLOA9
polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:AFS79082.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 790
SCNpilot_BF_INOC_scaffold_11_171
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

200239..200979
DNA (741bp) protein (247aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ABR50220.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ABR50220.1};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVK2_ALKMQ
SCNpilot_BF_INOC_scaffold_11_172
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


201001..202152
DNA (1152bp) protein (384aa)
Predicted 30S ribosomal protein S1 n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GNN9_CLOLD
RNA binding S1 domain protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_11_173
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

202292..204745
DNA (2454bp) protein (818aa)
peptidase S16 with C-terminal Lon domain (EC:3.4.21.-)
Peptidase S16 with C-terminal Lon domain {ECO:0000313|EMBL:AFS79551.1}; EC=3.4.21.- {ECO:0000313|EMBL:AFS79551.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia
Peptidase S16 with C-terminal Lon domain n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4Q3_CLOA9
SCNpilot_BF_INOC_scaffold_11_174
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(204735..205307)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcacea
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F4C7_DESDL
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_BF_INOC_scaffold_11_175
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

205491..206177
DNA (687bp) protein (229aa)
Cell division transporter, ATP-binding protein FtsE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CB69_9CLOT
Cell division transporter, ATP-binding protein FtsE {ECO:0000313|EMBL:EOC99549.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="
ftsE; cell division ATP-binding protein ftsE
SCNpilot_BF_INOC_scaffold_11_176
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

206167..207060
DNA (894bp) protein (298aa)
Cell division protein FtsX n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ3_ALKMQ
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
SCNpilot_BF_INOC_scaffold_11_177
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

207070..208209
DNA (1140bp) protein (380aa)
Membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASC6_9CLOT
Peptidase M23 {ECO:0000313|EMBL:KGG80243.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
peptidase M23B
SCNpilot_BF_INOC_scaffold_11_178
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

208211..209437
DNA (1227bp) protein (409aa)
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQZ6_9CLOT
Peptidase S41 {ECO:0000313|EMBL:KGG80242.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
SCNpilot_BF_INOC_scaffold_11_179
unknown

Not on your lists

209454..209654
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_180
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

209778..211757
DNA (1980bp) protein (660aa)
UvrABC system protein B n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ09_ALKOO
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
Displaying items 151-180 of 320 in total

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