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SCNpilot_BF_INOC_scaffold_11_172

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 201001..202152

Top 3 Functional Annotations

Value Algorithm Source
Predicted 30S ribosomal protein S1 n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GNN9_CLOLD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 387.0
  • Bit_score: 346
  • Evalue 3.60e-92
RNA binding S1 domain protein similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 387.0
  • Bit_score: 346
  • Evalue 1.00e-92
Tax=BJP_IG2102_Clostridiales_34_350 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 382.0
  • Bit_score: 347
  • Evalue 2.30e-92

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Taxonomy

BJP_IG2102_Clostridiales_34_350 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGAAAATCAAACTATGGATGAAATGCTAAATCAATTTGGAATGACTGAAAAACTCTATACTGGTGATGTGGTAGAGGGGACTGTAATTTCATCTAATGCGGATGAGGTAATGGTTAACATTCGGTATATGGCAGATGGTATATTGCCAAAAGCTGAACTTCCTGATGGCAATCCATTGGACTTCAGAGAAGGCGATCAAATAAAGGTCTATGTTATGAAGTTAGATGATGGTGACGGCAACGTAATGCTCTCTCTGACAAAAGCTTATGAATTAATCATTTGGGATGAGTTTCAGGAACTTTTTGATGCTGGAAAAACGTTTAAGGTAAAGGTTAAAGAAGCTGTTAAAGGTGGCGTAGTTGCACTTTACAGGGGTGCACGTGTCTTTATACCAGCTTCACAGCTATCGTTGAGCTTTGTTTCTGAGCTAAATGTCTATTTAGGCAATAATTTGGAAGTGAAGCTAACCGAATATTCAGCCGAAAGCAAGAAAGTAGTTGCATCACATAAGGTAATTCTTCAAAATCAATTAGCTGTAAAAAAAGCGGATCTGATTTCTAGAATCAGTCCGGAGGATAAGCTGACTGGAACTGTGGTAAGAATTGCAGATTATGGTGCTTTTGTGGATTTGGGTGGCGTTGATGGCTTGATACACATTTCACAGTTGTCTTGGAAACGCGTTAAGCATCCTTCAGAGGTGTTAAAAGAAGGTGATGTTGTTGAGGTGATTGTGTTATCTGTCGATCGTGACAAAGAAAAGATTTCGCTTAAGTTGGCTCAAATACAGCAAAATCCTTGGGAAACCATTAGCGATCGCTATGCAGTTGAGGATATAATTATCGGAAAAGTAACGAAGTACATGACCTTTGGTGTTTTTGTTGAGGTTGAAGAAGGTGTCGAGGGTTTGATTCATATCTCTGAGCTTTCCGAGGAACATGTTAATCGACCACAAGACGTCGTTAAAATTGGCGATGAGGTTGAAGCGATGATCATTGAACTAGATGCGGCAGCTCACAGAATGTCCCTTAGCATGAAAGCGGTTGCATCAATAGATGAAGCTGATTATGAAGCGTTTGAACAAGACGAAGTCCAAAATACAACCCTATCAGATTTATTTGGAGACAAGCTAAAAAACTTAAAACTTAAATAA
PROTEIN sequence
Length: 384
MENQTMDEMLNQFGMTEKLYTGDVVEGTVISSNADEVMVNIRYMADGILPKAELPDGNPLDFREGDQIKVYVMKLDDGDGNVMLSLTKAYELIIWDEFQELFDAGKTFKVKVKEAVKGGVVALYRGARVFIPASQLSLSFVSELNVYLGNNLEVKLTEYSAESKKVVASHKVILQNQLAVKKADLISRISPEDKLTGTVVRIADYGAFVDLGGVDGLIHISQLSWKRVKHPSEVLKEGDVVEVIVLSVDRDKEKISLKLAQIQQNPWETISDRYAVEDIIIGKVTKYMTFGVFVEVEEGVEGLIHISELSEEHVNRPQDVVKIGDEVEAMIIELDAAAHRMSLSMKAVASIDEADYEAFEQDEVQNTTLSDLFGDKLKNLKLK*