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SCNpilot_BF_INOC_scaffold_11

Search features with annotation key words

Displaying items 211-240 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_11_211
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

241708..242130
DNA (423bp) protein (141aa)
AP4A hydrolase n=3 Tax=Clostridium difficile RepID=T2Z951_CLODI
NUDIX hydrolase
AP4A hydrolase ApfA {ECO:0000313|EMBL:KDR94879.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM
SCNpilot_BF_INOC_scaffold_11_212
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

242130..243077
DNA (948bp) protein (316aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=WHIA_ALKMQ
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000255|HAMAP-Rule:MF_01420}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alka
SCNpilot_BF_INOC_scaffold_11_213
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

243079..244308
DNA (1230bp) protein (410aa)
Putative ABC transporter, solute-binding protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMY5_9CLOT
extracellular solute-binding family protein
Extracellular solute-binding family protein {ECO:0000313|EMBL:AKA68267.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scato
SCNpilot_BF_INOC_scaffold_11_214
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

244323..247805
DNA (3483bp) protein (1161aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkalip
DNA polymerase III, alpha subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLX8_ALKOO
SCNpilot_BF_INOC_scaffold_11_215
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

247824..248783
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CW42_9CLOT
pfkA; 6-phosphofructokinase
SCNpilot_BF_INOC_scaffold_11_216
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

248827..250587
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter
Pyruvate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUM0_9CLOT
pyruvate kinase
SCNpilot_BF_INOC_scaffold_11_217
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

250602..251615
DNA (1014bp) protein (338aa)
UPI0003D630DC related cluster n=1 Tax=unknown RepID=UPI0003D630DC
Uncharacterized protein {ECO:0000313|EMBL:ETI93510.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlet
aldo/keto reductase
SCNpilot_BF_INOC_scaffold_11_218
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(251643..252125)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD107 RepID=J8JPQ1_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR53618.1}; TaxID=1053229 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD107.;
short chain dehydrogenase/reductase family oxidoreductase
SCNpilot_BF_INOC_scaffold_11_219
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(252136..252549)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EGR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93712.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_220
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

252648..253370
DNA (723bp) protein (241aa)
Cyclic nucleotide-binding protein n=1 Tax=Clostridium sp. BL8 RepID=T0PA66_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KIE45134.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argen
cyclic nucleotide-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_11_221
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(253436..254743)
DNA (1308bp) protein (436aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF27446.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_11_222
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

254901..256016
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM52_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18219.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
SCNpilot_BF_INOC_scaffold_11_223
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

256028..256702
DNA (675bp) protein (225aa)
ABC transporter related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM53_ALKOO
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABW18220.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
SCNpilot_BF_INOC_scaffold_11_224
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

256689..257570
DNA (882bp) protein (294aa)
Cell division protein FtsX n=1 Tax=Clostridium ultunense Esp RepID=M1ZGT5_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_225
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(257644..259245)
DNA (1602bp) protein (534aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWG5_CLOSD
prfC; peptide chain release factor RF-3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia;
SCNpilot_BF_INOC_scaffold_11_226
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

259450..260226
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF47_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27482.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_227
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

260251..261723
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0P7U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB85973.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
methyl-accepting chemotaxis sensory transducer
SCNpilot_BF_INOC_scaffold_11_228
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(261709..263598)
DNA (1890bp) protein (630aa)
yfmR; putative ABC transporter ATP-binding protein YfmR (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XFS6_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_229
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

263659..264945
DNA (1287bp) protein (429aa)
Aminopeptidase P domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D5W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGG81330.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_230
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264945..265202
DNA (258bp) protein (86aa)
hypothetical protein; K06940 id=5081578 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_BF_INOC_scaffold_11_231
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


265638..267713
DNA (2076bp) protein (692aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:CBH20148.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CBH20148.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
Aspartyl-tRNA synthetase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PQZ9_CLOSD
SCNpilot_BF_INOC_scaffold_11_232
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

267722..269179
DNA (1458bp) protein (486aa)
gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=499177
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR00_CLOSD
SCNpilot_BF_INOC_scaffold_11_233
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

269176..270591
DNA (1416bp) protein (472aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PR04_CLOSD
SCNpilot_BF_INOC_scaffold_11_234
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(270779..271771)
DNA (993bp) protein (331aa)
hutG; Formimidoylglutamase (Formiminoglutamase) (Formiminoglutamate hydrolase) (EC:3.5.3.8) rbh
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAM
Formimidoylglutamase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTF1_CLOSD
SCNpilot_BF_INOC_scaffold_11_235
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

271976..273430
DNA (1455bp) protein (485aa)
Probable cytosol aminopeptidase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHT9_CLOPF
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=445334 speci
leucyl aminopeptidase
SCNpilot_BF_INOC_scaffold_11_236
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

273442..273933
DNA (492bp) protein (164aa)
Rubrerythrin n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM79_ALKOO
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABW18246.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clos
SCNpilot_BF_INOC_scaffold_11_237
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

273937..274446
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LQK0_9CLOT
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CEN31521.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
SCNpilot_BF_INOC_scaffold_11_238
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

274566..275291
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JRT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB25123.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_239
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

275284..276555
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacte
glnK; sensor histidine kinase GlnK (EC:2.7.13.3)
Two-component sensor kinase SA14-24 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CH49_9CLOT
SCNpilot_BF_INOC_scaffold_11_240
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

276571..277428
DNA (858bp) protein (286aa)
Two-component response regulator, controling glutamine utilization n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYG6_9CLOT
Two-component response regulator, controling glutamine utilization {ECO:0000313|EMBL:EOD01619.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibac
Response regulator of citrate/malate metabolism
Displaying items 211-240 of 320 in total

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