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SCNpilot_BF_INOC_scaffold_11

Search features with annotation key words

Displaying items 271-300 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_11_271
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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317444..320086
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium difficile T23 RepID=U3YAF2_CLODI
SCNpilot_BF_INOC_scaffold_11_272
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

320077..321375
DNA (1299bp) protein (433aa)
FolC bifunctional protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MID3_ALKOO
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
FolC bifunctional protein {ECO:0000313|EMBL:ABW19565.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
SCNpilot_BF_INOC_scaffold_11_273
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(321538..323205)
DNA (1668bp) protein (556aa)
peptidase C1A papain n=1 Tax=Clostridium arbusti RepID=UPI0002885917
Chitin binding protein {ECO:0000313|EMBL:AKB56772.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ba
Chitin binding protein
SCNpilot_BF_INOC_scaffold_11_274
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(323282..323815)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG79879.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_275
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(324200..325375)
DNA (1176bp) protein (392aa)
Putative membrane protein n=2 Tax=Turicibacter RepID=D4W835_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EFF62855.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter san
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_276
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

325560..326093
DNA (534bp) protein (178aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EQF22999.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EQF22999.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococ
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium difficile CD160 RepID=T3D562_CLODI
SCNpilot_BF_INOC_scaffold_11_277
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(326145..326852)
DNA (708bp) protein (236aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2Q9H4_9ENTE
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
SCNpilot_BF_INOC_scaffold_11_278
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(327029..327802)
DNA (774bp) protein (258aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GF86_EUBLK
dihydrodipicolinate reductase
SCNpilot_BF_INOC_scaffold_11_279
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(327795..328679)
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Caloramator australicus RC3 RepID=G0V4T7_9CLOT
SCNpilot_BF_INOC_scaffold_11_280
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(328676..329677)
DNA (1002bp) protein (334aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase id=1774734 bin=GWB2_Clostridiales_37_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Tax=BJP_IG2103_Clostridiales_50_15
SCNpilot_BF_INOC_scaffold_11_281
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

329908..331056
DNA (1149bp) protein (383aa)
amidohydrolase (EC:3.5.1.32)
N-acyl-L-amino acid amidohydrolase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FI30_9BACT
Amidohydrolase {ECO:0000313|EMBL:KJF28421.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_11_282
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

331090..332019
DNA (930bp) protein (310aa)
Abortive infection protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIB9_ALKOO
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ABW19551.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
SCNpilot_BF_INOC_scaffold_11_283
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

332028..332768
DNA (741bp) protein (247aa)
Methyltransferase type 11 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIB1_ALKOO
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ABW19543.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
SCNpilot_BF_INOC_scaffold_11_284
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

332780..333673
DNA (894bp) protein (298aa)
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1156417 species="Bacteria; Firmicutes; Clostr
hslO; 33 kDa chaperonin
33 kDa chaperonin id=1774821 bin=GWB2_Clostridiales_37_7 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
SCNpilot_BF_INOC_scaffold_11_285
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

333710..334417
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYB4_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE95639.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" sour
SCNpilot_BF_INOC_scaffold_11_286
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

334422..335018
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00911.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
SCNpilot_BF_INOC_scaffold_11_287
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

335507..337441
DNA (1935bp) protein (645aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUT9_9CLOT
SCNpilot_BF_INOC_scaffold_11_288
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

337729..338244
DNA (516bp) protein (172aa)
Translation initiation factor IF-3 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLQ0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococc
infC; translation initiation factor IF-3
SCNpilot_BF_INOC_scaffold_11_289
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


338274..338471
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=3 Tax=Staphylococcus RepID=I7JHK6_9STAP
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
LSU ribosomal protein L35p
SCNpilot_BF_INOC_scaffold_11_290
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


338501..338854
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUU5_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;"
50S ribosomal protein L20
SCNpilot_BF_INOC_scaffold_11_291
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

339101..340150
DNA (1050bp) protein (350aa)
phosphate acetyltransferase (EC:2.3.1.8)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BYA3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50806.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM
SCNpilot_BF_INOC_scaffold_11_292
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

340349..341707
DNA (1359bp) protein (453aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Potassium uptake protein, integral membrane component, KtrB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWB3_9CLOT
ATP synthase subunit J {ECO:0000313|EMBL:KJF28417.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_11_293
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

341762..342409
DNA (648bp) protein (216aa)
TrkA-N domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI80_ALKOO
TrkA domain-containing protein
Potassium transporter Trk {ECO:0000313|EMBL:KJF28283.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_11_294
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

342411..343241
DNA (831bp) protein (277aa)
RNA methyltransferase, TrmH family n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPW4_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFD05833.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostrep
TrmH family RNA methyltransferase
SCNpilot_BF_INOC_scaffold_11_295
unknown

Not on your lists

343254..343376
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_11_296
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


343629..344648
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W3F8_CLOBI
SCNpilot_BF_INOC_scaffold_11_297
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


344666..347056
DNA (2391bp) protein (797aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWB8_9CLOT
SCNpilot_BF_INOC_scaffold_11_298
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

347217..348554
DNA (1338bp) protein (446aa)
Mate efflux family protein n=2 Tax=Clostridium botulinum B RepID=B2TS09_CLOBB
mate efflux family protein
Multidrug transporter MatE {ECO:0000313|EMBL:KIL06957.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
SCNpilot_BF_INOC_scaffold_11_299
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

348643..350262
DNA (1620bp) protein (540aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacillus cereus Rock3-44 RepID=C2W928_BACCE
ABC transporter ATP-binding protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_11_300
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

350479..350679
DNA (201bp) protein (67aa)
cold-shock protein n=1 Tax=Clostridium arbusti RepID=UPI000289F5FC
cold shock protein
Cold-shock protein {ECO:0000313|EMBL:KEZ87322.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Displaying items 271-300 of 320 in total

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