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SCNpilot_BF_INOC_scaffold_11_288

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 337729..338244

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLQ0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 166.0
  • Bit_score: 209
  • Evalue 2.40e-51
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococc similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 166.0
  • Bit_score: 209
  • Evalue 3.30e-51
infC; translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 200
  • Evalue 4.00e-49

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Taxonomy

Ruminococcus sp. CAG:108 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
GTGTATCTTATTAAAACAGCTGAAATCAATGAAGAAATTCGCGACCTTGAAGTAAGAGTTATCGGAGATGACAACGAACAATTAGGTGTGATGTCGAGTAAAGAAGCTTATGCTTTGGCACAAGAACGCAAACTTGACCTTGTAAAAATCGCTCCTAACGCTAAACCACCGGTATGCAAAATCATGGACTTTGGTAAGTTTAGATATGAACAACAAAAAAGAGACAAAGAAGCACGTAAGAAGCAAAAAAGTGCTCAAGTTAAAGAAATTAGACTTGGTCTCAATATTGAGAAAAATGACTTAGAAACCAAATCCAAGAATGCAATCAAATTCTTACAAAGTGGAGATAAGGTGAAAGTTTCTTTAAGATTCAAGGGCCGTGAAATGGGTTATACTCAACAAGGTTTTGAGGTAATTAAGAAATTTAGCGCAGCTCTTGAAGAAGTTGCTAGCCTTGAAGCTCCAGCAAAATTAGAAGGTAGAAGCTTAGTTGCAACCTATGCACCTAAAAAATAA
PROTEIN sequence
Length: 172
VYLIKTAEINEEIRDLEVRVIGDDNEQLGVMSSKEAYALAQERKLDLVKIAPNAKPPVCKIMDFGKFRYEQQKRDKEARKKQKSAQVKEIRLGLNIEKNDLETKSKNAIKFLQSGDKVKVSLRFKGREMGYTQQGFEVIKKFSAALEEVASLEAPAKLEGRSLVATYAPKK*