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SCNpilot_BF_INOC_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_127_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136..885)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6I3_CLOSW
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADL05393.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
SCNpilot_BF_INOC_scaffold_127_2
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(952..1368)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RS28_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF85575.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_3
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1407..1772)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFV1_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:EDU36676.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2209..2688)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KXX0_9FIRM
BFD-like [2Fe-2S] binding domain {ECO:0000313|EMBL:CRH79108.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trac
BFD domain-containing protein (2Fe-2S)-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_127_5
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(2832..4676)
DNA (1845bp) protein (615aa)
Cadmium-translocating P-type ATPase n=1 Tax=Acholeplasma brassicae RepID=U4KMW6_9MOLU
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:CCV65511.1}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma b
cadA; Cadmium-translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_127_6
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4692..4913)
DNA (222bp) protein (74aa)
Heavy metal-associated domain protein n=9 Tax=Bacteria RepID=C2KX99_9FIRM
Cation-transporting P family ATPase
Uncharacterized protein {ECO:0000313|EMBL:EGF85767.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M34
SCNpilot_BF_INOC_scaffold_127_7
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5059..5427)
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=4 Tax=Bacteria RepID=C5NY70_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF85768.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M34
HTH transcriptional regulator, ArsR
SCNpilot_BF_INOC_scaffold_127_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6189..6512)
DNA (324bp) protein (108aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLA4_ALKMQ
addiction module antitoxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:ABR46972.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus meta
SCNpilot_BF_INOC_scaffold_127_9
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6505..6789)
DNA (285bp) protein (95aa)
Prevent-host-death family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLA3_ALKMQ
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABR46971.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredi
SCNpilot_BF_INOC_scaffold_127_10
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6886..7098)
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E0NJV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFM25896.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BA
SCNpilot_BF_INOC_scaffold_127_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7516..7779)
DNA (264bp) protein (88aa)
Excinuclease ABC, C subunit domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPB7_ALKMQ
excinuclease ABC subunit C
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:ABR48035.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
SCNpilot_BF_INOC_scaffold_127_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7971..8678)
DNA (708bp) protein (236aa)
Peptidase, membrane zinc metallopeptidase, putative n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRW5_ALKMQ
peptidase, membrane zinc metallopeptidase rbh
Peptidase, membrane zinc metallopeptidase, putative {ECO:0000313|EMBL:ABR48933.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkali
SCNpilot_BF_INOC_scaffold_127_13
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8705..9559)
DNA (855bp) protein (285aa)
MATE efflux family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9T0_CLOSW
Multidrug transporter MatE {ECO:0000313|EMBL:KEZ86519.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
MATE efflux family protein
SCNpilot_BF_INOC_scaffold_127_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9614..10102)
DNA (489bp) protein (163aa)
MATE efflux family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9T0_CLOSW
Multidrug transporter MatE {ECO:0000313|EMBL:KEZ86519.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
MATE efflux family protein
SCNpilot_BF_INOC_scaffold_127_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10086..10541)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9T1_CLOSW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADL04131.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (str
SCNpilot_BF_INOC_scaffold_127_16
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10671..11030)
DNA (360bp) protein (120aa)
Addiction module antitoxin n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STV0_SYNGF
addiction module antitoxin
Addiction module antitoxin {ECO:0000313|EMBL:ADY55390.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus
SCNpilot_BF_INOC_scaffold_127_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(11218..11499)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q3G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27554.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
SCNpilot_BF_INOC_scaffold_127_18
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11540..11767)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XYW8_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ91674.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="D
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11789..12340)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LU94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62345.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_20
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12330..12665)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W6N2_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV64141.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (
SCNpilot_BF_INOC_scaffold_127_21
unknown

Not on your lists

comp(12715..13125)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_127_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13392..15692)
DNA (2301bp) protein (767aa)
Antirepressor regulating drug resistance protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M008_CLOCD
antirepressor regulating drug resistance protein rbh
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AEV70115.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostri
SCNpilot_BF_INOC_scaffold_127_23
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15695..16057)
DNA (363bp) protein (121aa)
Transcriptional repressor, CopY family n=1 Tax=Clostridium thermocellum JW20 RepID=D1NJY5_CLOTM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AEV70116.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clari
SCNpilot_BF_INOC_scaffold_127_24
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16467..18482)
DNA (2016bp) protein (672aa)
RNA methyltransferase, TrmA family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6I6_CLOSW
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EXG87684.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
TrmA family RNA methyltransferase
SCNpilot_BF_INOC_scaffold_127_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18554..19276)
DNA (723bp) protein (241aa)
Transcriptional regulator Crp/Fnr family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LID0_ACEWD
transcriptional regulator Crp/Fnr family
Transcriptional regulator Crp/Fnr family {ECO:0000313|EMBL:AFA47304.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium
SCNpilot_BF_INOC_scaffold_127_26
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(19388..19582)
DNA (195bp) protein (65aa)
Putative uncharacterized protein id=3856473 bin=GWF2_Clostridiales_36_10 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein Tax=GWF2_Clostridiales_36_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_27
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19898..20665)
DNA (768bp) protein (256aa)
Putative dioxygenase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXP7_CLOSD
zupT; putative dioxygenase rbh
Putative dioxygenase {ECO:0000313|EMBL:CBH21212.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (s
SCNpilot_BF_INOC_scaffold_127_28
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20778..21989)
DNA (1212bp) protein (404aa)
Uncharacterized protein {ECO:0000313|EMBL:KGG81287.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
SCNpilot_BF_INOC_scaffold_127_29
unknown

Not on your lists

comp(22011..22127)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_127_30
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22143..22607)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RIA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGG81286.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
RNA polymerase sigma factor
Displaying items 1-30 of 121 in total

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